Query= MSMg01no149_g13.b1 MSMg01no149_g13.b1 CHROMAT_FILE:
MSMg01no149_g13.b1 PHD_FILE: MSMg01no149_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:40 2005
(594 letters)
>mm_chr16_25556544_25557537
Length = 994
Score = 1094 bits (566), Expect = 0.0
Identities = 585/592 (98%), Gaps = 2/592 (0%)
Strand = Plus / Minus
Query: 5 gaattctctagaacacttcagaccatagtcaaaaacctatgtaaaacaaagaaacagaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaattctctagaacacttcagaccatagtcaaaaacctatgtaaaacaaagaaacagaga 609
Query: 65 aacaaacaaaaaacccaagggcttctagttaccttcatgacaaatcacaaagggctcagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aacaaacaaaaaacccaagggcttctagttaccttcatgacaaatcacaaagggctcagc 549
Query: 125 ttcacttgtacatgtttgacctagcctagccttctaattctcagttcctgccctactgcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttcacttgtacatgtttgacctagcctagccttctaattctcagttcctgccctactgcc 489
Query: 185 tcaacaccactcataccccagcccacaaaagtgtgctcctatagaagattagactcttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcaacaccactcataccccagcccacaaaagtgtgctcctatagaagattagactcttgt 429
Query: 245 ttcatcatttacttaatgagaaaatcatacttcaaggaggcaaagtctattttcaagtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttcatcatttacttaatgagaaaatcatacttcaaggaggcaaagtctattttcaagtga 369
Query: 305 agttgtgtgtcttccctaaggctcgttatttactcaagactggagcagacctcaacacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agttgtgtgtcttccctaaggctcgttatttactcaagactggagcagacctcaacacat 309
Query: 365 gcccataccctcatgctgtctctcctcatccatgctgcccagagagaaattatactttct 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcccataccttcatgctgtctctcctcatccatgctgcccagagagaaattatactttct 249
Query: 425 cttccttacatatgcaagccctttgttctagagtgttcttttcttttttt--tttctttt 482
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 248 cttccttacatatgcaagccctttgttctagagtgttcttttcttttttttctttctttt 189
Query: 483 ttttgttagtaggtattttcctcatttacattttcaatgctatcccaaaggtcccccata 542
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttttattagtagctattttcctcatttacattttcaatgctatcccaaaggtcccccata 129
Query: 543 cccacccccccatcccctacccacccactccccctttttggccctggcgttc 594
||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cccacaccccaatcccctacccacccactccccctttttggccctggcgttc 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_g13.g1 MSMg01no149_g13.g1 CHROMAT_FILE:
MSMg01no149_g13.g1 PHD_FILE: MSMg01no149_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:40 2005
(620 letters)
>mm_chr16_25472770_25473791
Length = 1022
Score = 1127 bits (583), Expect = 0.0
Identities = 613/623 (98%), Gaps = 4/623 (0%)
Strand = Plus / Plus
Query: 1 tttcc-tctccagttctcatgattctgcaataactacttcctgaa-ataaaaataggtgg 58
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttccgtctccagttctcatgattctgcaataactacttcctgaacataaaaataggtgg 260
Query: 59 ccgatgggccagtggaatggtggctgccttccactcagagagaaatgttctcttcagggt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgatgggccagtggaatggtggctgccttccactcagagagaaatgttctcttcagggt 320
Query: 119 gagcagtccacggagctgggtatacatccaattctcaaggaggtctcttctccctcaagg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcagtccacggagctgggtatacatccaattctcaaggaggtctcttctccctcaagg 380
Query: 179 gagctacctcttagcttccttatgagttgctttccctccgagggattgatatgaccaaga 238
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gagctacctcttagcttccttatgagttgctttccctccgagggattgatacgaccaaga 440
Query: 239 acgctgaggtactcgtgtattctcagaagggaaaggtcctctaaaaatatggattgcctt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acgctgaggtactcgtgtattctcagaagggaaaggtcctctaaaaatatggattgcctt 500
Query: 299 gacctggcctcaacaggctggtactttatcctcttctccctaccccacccctgaatctat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacctggcctcaacaggctggtactttatcctcttctccctaccccacccctgaatctat 560
Query: 359 cttcagtaagagtggtatccaaatataaagtagatgggtcgaatcccattccacgggatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcagtaagagtggtatccaaatataaagtagatgggtcgaatcccattccacgggatc 620
Query: 419 ttgacatttctgtacttagaagaggataaagcagcagtgagctttaagtggcctaaacaa 478
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 ttgacatttctgtacttagaagaggataaagcagcagtgtgctttaagtggcctaaacaa 680
Query: 479 gggctgcagaacagctgctcttacttccagcgggatccctcaggcctg-gggaaaccggc 537
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 681 gggctgcagaacagctgctcttacttccagcaggatccctcaggccttagggaaaccggc 740
Query: 538 agaccaggggtcaccttgacaagtcctcttttcccaagcatttggagatcagatgtacat 597
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agacgaggg-tcaccttgacaagtcctcttttcccaagcatttggagatcagatgtacat 799
Query: 598 aatgcttaaggtgacactctgac 620
|||||||||||||| ||||||||
Sbjct: 800 aatgcttaaggtgaaactctgac 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1022
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1012
Effective search space: 617320
Effective search space used: 617320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
