Query= MSMg01no151_g07.b1 MSMg01no151_g07.b1 CHROMAT_FILE:
MSMg01no151_g07.b1 PHD_FILE: MSMg01no151_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:11 2005
(116 letters)
>mm_chr16_40158467_40158982
Length = 516
Score = 201 bits (104), Expect = 1e-56
Identities = 110/112 (98%)
Strand = Plus / Plus
Query: 5 gaattctctctggtccctaagtaaactctggaagcattcaacatctggttgattgcagag 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctctggcccctaagtaaactctggaagcattcaacatctggttgattgcagag 264
Query: 65 ataagagaggagagaagagaagtatcggttttcatctttaaatgaggttttc 116
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataagggaggagagaagagaagtatcggttttcatctttaaatgaggttttc 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 516
Length adjustment: 8
Effective length of query: 108
Effective length of database: 508
Effective search space: 54864
Effective search space used: 54864
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_g07.g1 MSMg01no151_g07.g1 CHROMAT_FILE:
MSMg01no151_g07.g1 PHD_FILE: MSMg01no151_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:11 2005
(420 letters)
>mm_chr16_40239339_40240158
Length = 820
Score = 756 bits (391), Expect = 0.0
Identities = 410/421 (97%), Gaps = 9/421 (2%)
Strand = Plus / Minus
Query: 1 cctatgatctcccaggaacccttcatctctaaagtaaatgtcaccactgagctgaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cctatgatctcccaggaacccttcatctctaaagtaaatgtcaccactgagctgaattaa 413
Query: 61 atgtatcatgcttacagtgttccaatatgctactttctcctctcgcgaagccatctcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atgtatcatgcttacagtgttccaatatgctactttctcctctcgcgaagccatctcagg 353
Query: 121 aaatacaggcttagactttctccttagtcatgtgacatgaccagctattcacccaggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aaatacaggcttagactttctccttagtcatgtgacatgaccagctattcacccaggttt 293
Query: 181 tccctcagttttaagagttgggggccatgttctatcatctgcaaccagacagctagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 292 tccctcagttttaagagttgggggccatgttctatcatctgcaaccagaaagctagctct 233
Query: 241 aggttatggtcatttcaattcagcttccttaaaaacaaacaaacaaacaaacaaacaaaa 300
||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 232 aggttatggccatttcaattcagcttccttaa--------aaacaaacaaacaaacaaaa 181
Query: 301 ccaaaacctacctgtacactaggcatgggatataatgtttctagatactctactccaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccaaaacctacctgtacactaggcatgggatataatgtttctagatactctactccaact 121
Query: 361 tttaccaggaaaataaaaaataaaataaaat-aaaaaataaataaaaatgaacagaagca 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 120 tttaccaggaaaataaaaaataaaataaaataaaaaaataaataaaaatgaacagaagca 61
Query: 420 a 420
|
Sbjct: 60 a 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
