Query= MSMg01no153_l20.b1 MSMg01no153_l20.b1 CHROMAT_FILE:
MSMg01no153_l20.b1 PHD_FILE: MSMg01no153_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:11 2005
(318 letters)
>mm_chr16_25314432_25315148
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 311/318 (97%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 1 gttggttaaacttgtggattgccttatgcagctcccattccagttttccttagctgatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gttggttaaacttgtggattgccttatgcagctcccattccagttttccttagctgatcc 424
Query: 61 tctcaaccctggtagccacagtcttgtttactctagacagatctctctgaggatacagag 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 423 tctcaaccctggtagccacagtcttgtttactctagacagatccctctgaggatacagag 364
Query: 121 tagggaagtactacctaagacatacgtggcagtacttatggacatgctcttgagtccagg 180
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 363 tagggaagtaccacctaagacatacttggcagtacttatggacatgctcttgagtccagg 304
Query: 181 ttgcccaccataggccttccttgactattcacaaggcattttaaaggcaggtaggtacaa 240
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 303 ttgcctaccataggccttccttgactattcaca-ggcattttaaaggcaggtaggtacaa 245
Query: 241 aaaggctgaaattgggcttagagaataaaagggatggagaagcaagagaaggagggagag 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 aaaggctgaaattgggcttagagaataaaagggatggagaagcaggagaaggagggagag 185
Query: 301 agggaagaagggagggag 318
|||||| |||||||||||
Sbjct: 184 agggaaaaagggagggag 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_l20.g1 MSMg01no153_l20.g1 CHROMAT_FILE:
MSMg01no153_l20.g1 PHD_FILE: MSMg01no153_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:11 2005
(501 letters)
>mm_chr16_25199657_25200557
Length = 901
Score = 917 bits (474), Expect = 0.0
Identities = 489/494 (98%)
Strand = Plus / Plus
Query: 1 cacaggctcaacttaaattcacttcaagagcgaaggagaattcaggggaggtaaacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cacaggctcaacttaaattcacttcaagagcgaaggagaattcaggggaggtaaatctcc 260
Query: 61 cagtaaagacttggtggctgtttggtattaagtgacatagtttgcttctgccaagtgcac 120
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaaagacttgttggctgtttggttttaagtgacatagtttgcttctgccaagtgcac 320
Query: 121 catcatccatgagtgacagaaggaggcatgcaggtaaaaacatgaaggatgcataaaagc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 catcatccatgagtgacagaaggaggcatgcaggtaaaaacataaaggatgcataaaagc 380
Query: 181 atgggaaggatgtgggcacatctggtctggagaaccatgctgtttggtttaggagacctg 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgggaaggaggtgggcacatctggtctggagaaccatgctgtttggtttaggagacctg 440
Query: 241 gtccttgcttggctttctcctttcctggctgtgtaattttagacagagcattaattagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccttgcttggctttctcctttcctggctgtgtaattttagacagagcattaattagtc 500
Query: 301 cctcttgttttgaggatgattaaccaagagaaaatgaaagtgtgcacacatgggctgggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcttgttttgaggatgattaaccaagagaaaatgaaagtgtgcacacatgggctgggt 560
Query: 361 tcagtacagaagtacttggtttaagttttaaagtatgctttatctaggagacaggaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagtacagaagtacttggtttaagttttaaagtatgctttatctaggagacaggaagac 620
Query: 421 ctagaactatgtttggcatcttatcaggaggccagaaaactggtggtgaattctgtcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctagaactatgtttggcatcttatcaggaggccagaaaactggtggtgaattctgtcatc 680
Query: 481 taactctttttttt 494
||||||||||||||
Sbjct: 681 taactctttttttt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
