Query= MSMg01no154_a10.b1 MSMg01no154_a10.b1 CHROMAT_FILE:
MSMg01no154_a10.b1 PHD_FILE: MSMg01no154_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:32 2005
(592 letters)
>mm_chr16_41842914_41843901
Length = 988
Score = 982 bits (508), Expect = 0.0
Identities = 545/558 (97%), Gaps = 6/558 (1%)
Strand = Plus / Minus
Query: 36 ctattagaccagtggttctcaggctgtgggttgtgagccctttggcaaacctttctccaa 95
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 988 ctattagaccagtggttctcaggctgtgggttgtgag-cctttggcaaacctttctccaa 930
Query: 96 aaatatttacattacaattcagaacaagagcaaaatcgcagttattaattagtagtgaaa 155
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 929 aaatatttacattacaattcagaacaagagcaaaatcgcagttattaattagtaatgaaa 870
Query: 156 gcaatgtcatggttgtgggtcaccacaacatgaagaactgta-taaaaaggtcacagcat 214
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 869 gcaatgtcatggttgtgggtcaccacaacatgaaaaactgtattaaaaaggtcacagcat 810
Query: 215 tacgaaggttgagaatcactgtattgggctgcatatttggccccaactcagtgagatggc 274
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 809 tacgaaggttgagaatcactgtattgggctgcatatttggcgccaactc--tgagatggc 752
Query: 275 ttccttttttcaaaatcaggtaactatgcctacctattaattaaatatatgttttgaaaa 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttcc-tttttcaaaatcaggtaactatgcctacctattaattaaatatatgttttgaaaa 693
Query: 335 aacataactaaaattatttttggggtacattatatatgttgattagaataatcaaaaatt 394
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 692 aacataactaaaattattttcggggtacattatatatgttgattagaatagtcaaaaatt 633
Query: 395 atttttatggaatttagattttactttaataacatagttaaatgaattcagatcctgttt 454
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 632 atttttatggaatttagattttactttaataacatagttaaatgaattcaaatcctgttt 573
Query: 455 ctagcaaatgataaagtctaacacatggtatccaaggtgagctctctgtccaattagggc 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctagcaaatgataaagtctaacacatggtatccaaggtgagctctctgtccaattagggc 513
Query: 515 attcctatctttttactctcttataaattttttatgattcttagcgatttttgaaaattg 574
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 512 attcctatctttttactctcttataaa-tttttatgattcttagcgatttttgaaaatta 454
Query: 575 taagtagggatgataaag 592
||||||||||||||||||
Sbjct: 453 taagtagggatgataaag 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 988
Length adjustment: 10
Effective length of query: 582
Effective length of database: 978
Effective search space: 569196
Effective search space used: 569196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_a10.g1 MSMg01no154_a10.g1 CHROMAT_FILE:
MSMg01no154_a10.g1 PHD_FILE: MSMg01no154_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:32 2005
(527 letters)
>mm_chr16_41721084_41722010
Length = 927
Score = 1011 bits (523), Expect = 0.0
Identities = 526/527 (99%)
Strand = Plus / Plus
Query: 1 ctcaggattttctcaaagtgctgctctgcttttccacggtggtgtgcacaaaggtctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaggattttctcaaagtgctgctctgcttttccacggtggtgtgcacaaaggtctgcc 260
Query: 61 ccaatattcttgccttgctggttggctttgcacagaagcaggtttttaaatgcactaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaatattcttgccttgctggttggctttgcacagaagcaggtttttaaatgcactaggg 320
Query: 121 gaaagcagcttttactaaatgttttataacgtgtcagaaaacctttatcgaacatttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagcagcttttactaaatgttttataacgtgtcagaaaacctttatcgaacatttaat 380
Query: 181 ccaaaacctggctttgaaccagggaggcatacaattcagtaattaatttttttttacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaaacctggctttgaaccagggaggcatacaattcagtaattaatttttttttacctt 440
Query: 241 cttttgctaatcgctgataaaaagcttaattctattaagaactcgacttgacaaattgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttgctaatcgctgataaaaagcttaattctattaagaactcgacttgacaaattgca 500
Query: 301 ccgctcaacggaagcgtttagaaattaattacgcattttattgcattagatcggataaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccgctcaacggaagcgtttagaaattaattacgcattttattgcattagatcggataaac 560
Query: 361 agggaaagaccaggaagaaaaagcaaaaatgtgggggtggaagaagaaaagtggtcaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agggaaagaccaggaagaaaaagcaaaaatgtgggggtggaagaagaaaagtggtcaaat 620
Query: 421 agaaacaacctattggtgtctaactatttccattatgactcaatgtgtcacctgaagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaacaacctattggtgtctaactatttccattatgactcaatgtgtcacctgaagata 680
Query: 481 aatcaaataaacacagcgggatttcagataatatcctgtcctcatca 527
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 aatcaaataaacacagcgggatttcagataatatcctatcctcatca 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
