Query= MSMg01no154_p16.b1 MSMg01no154_p16.b1 CHROMAT_FILE:
MSMg01no154_p16.b1 PHD_FILE: MSMg01no154_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:46 2005
(587 letters)
>mm_chr16_52142556_52143541
Length = 986
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 5 gaattctgacaagtccaagtgtgggatatttaccataagtcattgtattttagggaattc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgacaagttcaagtgtgggatatttaccataagtcattgtattttagggaattc 264
Query: 65 catatgacgacttcatgctagtaaactattaaccgccggcccttcttccctgtgttccag 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 catatgacgacttcatgctagtaaaccattaaccgccggcccttcttccctgtgttccag 324
Query: 125 gagcagtatgaactgtattgtgaaatgggctccacttttcagctctgcaagatctgtgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagcagtatgaactgtattgtgaaatgggctccacttttcagctctgcaagatctgtgca 384
Query: 185 gagaatgacaaagatgtcaagattgagccttgcgggcatctgatgtgcacttcgtgcctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagaatgacaaagatgtcaagattgagccttgcgggcatctgatgtgcacttcgtgcctt 444
Query: 245 accgcgtggcaggtactgccttgttgtctgtcccgttcacacttcccctctcagccttcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accgcgtggcaggtactgccttgttgtctgtcccgttcacacttcccctctcagccttcc 504
Query: 305 acatcttactgactcaggaagtaatactcagaactgttttatctaaaatagtaacttaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatcttactgactcaggaagtaatactcagaactgttttatctaaaatagtaacttaca 564
Query: 365 ttaaaaaaaaaaacttactatgttgaatgcgtaaaattgatagctttgctgcgttttata 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaaaaaaaaaa-cttactatgttgaatgcgtaaaattgatagctttgctgcgttttata 623
Query: 425 ttgtgtttcttacatgcgtgtaacttaagttcctgttgattataagtggttctgcatccg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgtgtttcttacatgcgtgtaacttaagttcctgttgattataagtggttctgcatccg 683
Query: 485 tcttgccgttagtgtcatgatgacgccaagagagagtatttaccaggtgagcgcttccag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcttgccgttagtgtcatgatgacgccaagagagagtatttaccaggtgagcgcttccag 743
Query: 545 tcagctcacgtcatgctcctgggaagattctgaagttcggtgg 587
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 744 tcagctcacgtcgtgctcctgggaagattctgaagttcggtgg 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 986
Length adjustment: 10
Effective length of query: 577
Effective length of database: 976
Effective search space: 563152
Effective search space used: 563152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_p16.g1 MSMg01no154_p16.g1 CHROMAT_FILE:
MSMg01no154_p16.g1 PHD_FILE: MSMg01no154_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:46 2005
(533 letters)
>mm_chr16_52293383_52294315
Length = 933
Score = 1015 bits (525), Expect = 0.0
Identities = 531/533 (99%)
Strand = Plus / Minus
Query: 1 cgagagagccttagagggacacactagtcttccccagcctcaatctttgtgtttatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cgagagagccttagagggacacactagtcttccccagcctcaatctttgtgtttatctga 674
Query: 61 tttctgtccctggtactgacttcaccccgccatccttgctgccagtgttttgggcaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tttctgtccctggtactgacttcaccccgccatccttgctgccagtgttttgggcaacaa 614
Query: 121 ttggcaaaatgttattcgctactgcttacctctctctgctctccctaaacaaagtgctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttggcaaaatgttattcgctactgcttacctctctctgctctccctaaacaaagtgctcc 554
Query: 181 tgaagctgccaccggaagtctctctctacacccatagcttcagcattcctgcagtgactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgaagctgccaccggaagtctctctctacacccatagcttcagcattcctgcagtgactg 494
Query: 241 accttcactgacacctcagagcgcttagattcatcttcctgttcctggttgatgtattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 accttcactgacacctcagagcgcttagattcatcttcctgttcctggttgatgtattct 434
Query: 301 cagagtctgtttcagtcacccccatgcactgcatgtcaaccttcatcaccacatcttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cagagtctgtttcagtcacccccatgcactgcatgtcaaccttcatcaccacatcttaca 374
Query: 361 cacgtcatccctatctgttgttcacattcctctgggagaatacaattcccataccttcct 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cacttcatccctatctgttgttcacattcctctgggagaatacaattcccataccttcct 314
Query: 421 gtgagttctctatgccttgcccttatcatggagtcagctccttcttagtctttaaaacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgagttctctatgccttgcccttatcatggagtcagctccttcttagtctttaaaacac 254
Query: 481 agctctttcaaacaaaggaactcattcctttggacgcttcttagactcacaca 533
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 253 agctctttcaaacaaaggaattcattcctttggacgcttcttagactcacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
