Query= MSMg01no155_i08.b1 MSMg01no155_i08.b1 CHROMAT_FILE:
MSMg01no155_i08.b1 PHD_FILE: MSMg01no155_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:26 2005
(373 letters)
>mm_chr16_20168943_20169715
Length = 773
Score = 663 bits (343), Expect = 0.0
Identities = 360/367 (98%), Gaps = 4/367 (1%)
Strand = Plus / Plus
Query: 5 ggaattccagttaaatttttt--aagtcagaacccaaatgtcatggtcagcagatcttat 62
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccagttaaattttttttaagtcagaacccaaatgtcatggtcagcagatcttat 264
Query: 63 cccattacctgatggagaagaatctcttcttctgtagaagccgtagttttcttacttggc 122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccattaccggatggagaagaatctcttcttctgtagaagccgtagttttcttacttggc 324
Query: 123 ttacttgtcatgactacctttgtcccactttctaagagctgtgagagtgaactttgttaa 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcacttgtcatgactacctttgtcccactttctaagagctgtgagagtgaactttgttaa 384
Query: 183 gctagtcactgagtgtgtgttggactccaggctttttgtggagattacagaaatgaatgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctagtcactgagtgtgtgttggactccaggctttttgtggagattacagaaatgaatgc 444
Query: 243 ctggtcctttcatttggggagtttgatgttagactatccctaacctcgtgcatgtgagac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggtcctttcatttggggagtttgatgttagactatccctaacctcgtgcatgtgagac 504
Query: 303 taaagtgggctagtgtgacaccagtctgacagcagcttaccccatactgttgtgcatcca 362
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 505 taaagtgggctagtgtgacagcagtctgacagcagcttacc--atactgttgtgcatcca 562
Query: 363 gaggagg 369
|||||||
Sbjct: 563 gaggagg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_i08.g1 MSMg01no155_i08.g1 CHROMAT_FILE:
MSMg01no155_i08.g1 PHD_FILE: MSMg01no155_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:26 2005
(346 letters)
>mm_chr16_20334330_20335075
Length = 746
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 1 aaggacaactgtgtttctggctaaggatagaattgcagagacatcagattaaagactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaggacaactgtgtttctggctaaggatagaattgcagagacatcagattaaagactgct 309
Query: 61 ggagactgtcatcagatggaaccctctggcaaacaggaaaggagaagtccagaaaaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggagactgtcatcagatggaaccctctggcaaacaggaaaggagaagtccagaaaaacta 249
Query: 121 atctacacatgaaggtcatggagaaagtgggcatgtttgagtagatcgctattcctgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atctacacatgaaggtcatggagaaagtgggcatgtttgagtagatcgctattcctgcac 189
Query: 181 aaaacatcatgaccaagaagcaagttggggaggaaaggatttattcagcttactcttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aaaacatcatgaccaagaagcaagttggggaggaaaggatttattcagcttactcttcca 129
Query: 241 cattgctgttcatcactaaaggaagtcaggataaggactccacaaggtggaggaccttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cattgctgttcatcactaaaggaagtcaggataaggactccacaaggtggaggaccttga 69
Query: 301 aggcagagtggatacagaagccatggaggaatgaatgctgcctac 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aggcagagtggatacagaagccatggaggaatgaatgctgcctac 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
