Query= MSMg01no158_g15.b1 MSMg01no158_g15.b1 CHROMAT_FILE:
MSMg01no158_g15.b1 PHD_FILE: MSMg01no158_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:56 2005
(229 letters)
>mm_chr16_28567008_28567636
Length = 629
Score = 435 bits (225), Expect = e-127
Identities = 228/229 (99%)
Strand = Plus / Minus
Query: 1 agaaaacactttgaaaacaatctaaataataacgacattctagtgattgaatccccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agaaaacactttgaaaacaatctaaataataacgacattctagtgattgaatccccttgg 370
Query: 61 ggcccactttcatgaaacatatactctaaagtaaaggaaaaggcacaccaacagatgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggcccactttcatgaaacatatactctaaagtaaaggaaaaggcacaccaacagatgctg 310
Query: 121 tgctgtctgatttaaacggacatctagcggtttggtatcaagataggatgtgaatgccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 309 tgctgtctgatttaaacggacatctagcggtttggtatcaagataggatgtgaatgcaat 250
Query: 181 ccctcagtttctctctttctttttctcagagatgagtattcctggtcct 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccctcagtttctctctttctttttctcagagatgagtattcctggtcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_g15.g1 MSMg01no158_g15.g1 CHROMAT_FILE:
MSMg01no158_g15.g1 PHD_FILE: MSMg01no158_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:56 2005
(288 letters)
>mm_chr16_28411012_28411701
Length = 690
Score = 503 bits (260), Expect = e-147
Identities = 282/290 (97%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 cctgatattccccagatccaaattacccacgtgtgaaatgagattgtgataaaatatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgatattccccagatccaaattacccacgtgtgaaatgagattgtgataaaatatgat 260
Query: 61 tattgtttatcaatttttacaccaaactctctattgattgggccagttgactgatcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgtttatcaatttttacaccaaactctctattgattgggccagttgactgatcacaa 320
Query: 121 taacttcctgtattatgtagtactgagagctagcagataccactcaccagtcaggggggt 180
||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 321 taacttcctgtattatgcagtactgagagctagcagataccattcaacagtcaggggggt 380
Query: 181 gcatccatcaggctccacgctagcaagttcagaa--ggaagtgtgcacagtgggatgttc 238
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gcatccatcaggctccacgatagcaagttcagaacaggaagtgtgcacagtgggatgttc 440
Query: 239 ggcccacaggtttccagacatcctggatgattcccaaatgccacccctct 288
|||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 441 ggcccacaggtttccagacatcctggctgattcccacatgccacccctct 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
