MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-158M07
Chromosome	16 (Build37)
Map Location	94,966,594 - 95,087,997
singlet/doublet	doublet
Overlap gene	Kcnj6
Upstream gene	Cldn14, Sim2, Hlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3, Dscr3, Dyrk1a
Downstream gene	LOC666201, Kcnj15, Erg, Ets2, LOC625548, LOC100040997
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cldn14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56173 MGI:1860425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hlcs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110948 MGI:894646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622832
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	LOC100040857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Dscr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170765 MGI:2181192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545178
definition	note : developmental pluripotency associated 5 pseudogene pseudo : _no_value

name	Pigp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56176 MGI:1860433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22129 MGI:1276539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13185 MGI:1206040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dyrk1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13548 MGI:1330299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnj6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC666201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Kcnj15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16516 MGI:1310000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Erg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13876 MGI:95415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ets2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23872 MGI:95456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins pseudo : _no_value

name	LOC100040997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Cldn14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328493 GeneID:56173 MGI:1860425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 14 transcript_id : NM_019500.3

name	Sim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226236 GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 2 (Drosophila) transcript_id : NM_011377.2

name	Hlcs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803440 GeneID:110948 MGI:894646
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) transcript_id : NM_139145.3

name	LOC100040857 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268203 GeneID:100040857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040857 transcript_id : XM_001475398.1

name	Dscr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875389 GeneID:170765 MGI:2181192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 6 (human) transcript_id : NM_133229.1

name	Pigp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980951 GeneID:56176 MGI:1860433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class P transcript_id : NM_019543.2

name	Ttc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678452 GeneID:22129 MGI:1276539
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 3 transcript_id : NM_009441.1

name	Dscr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352653 GeneID:13185 MGI:1206040
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 3 transcript_id : NM_007834.2

name	Dyrk1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418934 GeneID:13548 MGI:1330299
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a transcript_id : NM_007890.1

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006995 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025584.2

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71051586 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_010606.2

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71051592 GeneID:16522 MGI:104781
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025590.1

name	Kcnj6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006996 GeneID:16522 MGI:104781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 6 transcript_id : NM_001025585.2

name	Kcnj15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872193 GeneID:16516 MGI:1310000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 15 transcript_id : NM_019664.4

name	Kcnj15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872184 GeneID:16516 MGI:1310000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 15 transcript_id : NM_001039057.1

name	Kcnj15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794640 GeneID:16516 MGI:1310000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 15 transcript_id : NM_001039056.1

name	Erg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130984 GeneID:13876 MGI:95415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : avian erythroblastosis virus E-26 (v-ets) oncogene related transcript_id : NM_133659.2

name	Ets2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542618 GeneID:23872 MGI:95456
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E26 avian leukemia oncogene 2, 3' domain transcript_id : NM_011809.2

name	LOC100040997 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268207 GeneID:100040997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : similar to CG7874-PA transcript_id : XM_001475624.1

name	Sim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226237 GeneID:20465 MGI:98307
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : single-minded 2 product : single-minded homolog 2 protein_id : NP_035507.2

name	Hlcs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982837 CCDS:CCDS28346.1 GeneID:110948 MGI:894646
definition	GO_function : GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004078 - biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004079 - biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity [Evidence IEA]; GO:0004080 - biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 note : biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase product : holocarboxylase synthetase protein_id : NP_631884.1

name	LOC100040857 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268204 GeneID:100040857
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475448.1

name	Dscr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875390 CCDS:CCDS28347.1 GeneID:170765 MGI:2181192
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : mouse homolog of human Down syndrome critical region gene 6 DSCR6 product : Down syndrome critical region homolog 6 protein_id : NP_573492.1

name	Pigp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506539 CCDS:CCDS28348.1 GeneID:56176 MGI:1860433
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017176 - phosphatidylinositol N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence IEA] codon_start : 1 note : phosphatidylinositol-glycan-class P; Down syndrome critical region gene c; phosphatidylinositol glycan, class P; Down syndrome critical region homolog 5 product : Down syndrome critical region protein c protein_id : NP_062416.1

name	Ttc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678453 GeneID:22129 MGI:1276539
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : tetratricopeptide repeat domain 3 protein_id : NP_033467.1

name	Dscr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681145 CCDS:CCDS28349.1 GeneID:13185 MGI:1206040
definition	GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : Down syndrome critical region gene a product : Down syndrome critical region protein A protein_id : NP_031860.1

name	Dyrk1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418935 CCDS:CCDS28350.1 GeneID:13548 MGI:1330299
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a protein_id : NP_031916.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051589 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2-1 is encoded by transcript variant Girk2-1 product : potassium inwardly-rectifying channel J6 isoform Girk2-1 protein_id : NP_001020755.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051587 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2A-1 is encoded by transcript variant Girk2A-1 product : potassium inwardly-rectifying channel J6 isoform Girk2A-1 protein_id : NP_034736.2

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051593 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2C is encoded by transcript variant Girk2C product : potassium inwardly-rectifying channel J6 isoform Girk2C protein_id : NP_001020761.1

name	Kcnj6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71051591 GeneID:16522 MGI:104781
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform Girk2B is encoded by transcript variant Girk2B product : potassium inwardly-rectifying channel J6 isoform Girk2B protein_id : NP_001020756.1

name	Kcnj15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872185 CCDS:CCDS28351.1 GeneID:16516 MGI:1310000
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IDA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; inward rectifier K+ channel Kir4.2 product : potassium inwardly-rectifying channel J15 isoform a protein_id : NP_001034146.1

name	Kcnj15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794641 GeneID:16516 MGI:1310000
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IDA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3; inward rectifier K+ channel Kir4.2 product : potassium inwardly-rectifying channel J15 isoform b protein_id : NP_001034145.1

name	Kcnj15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790079 GeneID:16516 MGI:1310000
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IDA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; inward rectifier K+ channel Kir4.2 product : potassium inwardly-rectifying channel J15 isoform b protein_id : NP_062638.1

name	Erg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526802 GeneID:13876 MGI:95415
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : avian erythroblastosis virus E-26 (v-ets) oncogene related protein_id : NP_598420.1

name	Ets2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542619 GeneID:23872 MGI:95456
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : E26 avian leukemia oncogene 2, 3' domain protein_id : NP_035939.2

name	LOC100040997 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268208 GeneID:100040997
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475674.1

name	LOC666201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666201
definition	number : 1 pseudo : _no_value

name	LOC625548 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268209 GeneID:625548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_032769.1

clone name	MSMg01-393K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-158M07.T7 (MSMg01no158_m07.b1)	MSMg01-158M07.TJ (MSMg01no158_m07.g1)
ACC	AG358888	AG358889
length	715	762
length of high quality (start - end)	234 (115 - 348)	289 (63 - 351)
definition	CHROMAT_FILE: MSMg01no158_m07.b1 PHD_FILE: MSMg01no158_m07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:24:21 2005	CHROMAT_FILE: MSMg01no158_m07.g1 PHD_FILE: MSMg01no158_m07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:24:21 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(94,966,594 - 94,966,826)	(95,087,712 - 95,087,997)
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTCTCCT GCCCGTAGAGTAGGATGACATCTTTGGGCGAATATATGTAAAGAAACCGA GACCATTTCACCCTATTCTTTTATTGTTCCAGTCAAAAAAAGAGGAACGC CTCAATATGTAAACAGTTTCCCTAACACAGCGATTTCTTAAATATATATA TTTATTTATTCTAAAAAAATTTGGCATTGTAGAGATTTCTCAATACATAA TTTGTGCTTTCGCATCAGGCATGCTTTCGCCTTGTCCGTGCGCAGACATA CTTGGATTGAGTACAGGGAGTTACAAAAGGATCGGAAGGTGGGTCGGTAT TCTTTTCCAGCGCTCGCACCTCTGCCTGGCTTTCACTTGTAAAAAGCATT GTGCCCCCCCCGCCAGCAATGACCTCAGAAGCAGGGGGCAGCTATTTTAC TGCAAAGAAATCTGAAGCCTTGACGGGAGACTTTGGGGAAGATGTTTCTC CCTGTGTTTTCTTGGCATCTCTAGAAGGTCATTGGTTTTGCTTAAAGAAA GCTACGGTGAATGTCCCAGCATTCTCAGCATATGAATTTGCTGGGCTTAT AATCAACTATTCCATGACACTGAAACTCCACTTTTTCCTTTTTTTTTTTT TCTCAAACTCCCTGAATTATCCTGTGATGTCTTGACCTTTGTGCCTAGGA ACTCTTGCTTTGGTT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXCAGGGAGAAATCAGGAAATTAGCAACCTCTAGTGAGAA AGAAGGCAGAGGTTGTACCCTTCTGTGTGTGAGAGCTGCTGTTTCTGGCT GCTGCTTGAACTTGCTGTAGGCAGTACGCTCCAGAAAAAAAACTACTCCT CCACCTCTCACACTGGTTTCAATAGAGTCTTCATGAAAAGCAAACAGAAT TCTCTCACATCAGAACTTCAAGGTTTTGTTTTTAAAGTCTCTTAACTCTA AACACTTAGCAAGGGTTTTTTGTGAATGTGTAAATTCCAAGAACAATATT TTTTTTTTTCCCACTCTCTACTTTTATAAGGATTATTTTTATTTTGTGTG TACCACCCCCTTTAAAAAAAAAAAAAAATATTTGGCTTGGGGTGGCTCCC CCCTCTCATCATCCCTTTTCTTGTTCTTTTCCATTCTCCCCACCTCTTTC ACTTTCCTTACCACTCCTCCTTTCCTTTTCTACTCTTACATCTATCTTCT TAAATAATCATTCCTTTACTTATCTTATCTTTCCTTTTCTCCCCTCCACT TCTTTTTCTTTCTCTATTCATCTCCTTTCCCCCTCTTTCTCCATTTTCTC TATTTATCTTATCCACTTCCTTCCCCTTCATCTATAACTTTTGTAATCAC TACTCCCCTATTTCTTACTTTTCTCTTCTTATCTCCTAATTTCATTCCTT TTCCTCTTCTTT
quality values	Open. Hide. 16 16 16 19 10 8 8 15 15 20 27 44 30 24 24 24 20 21 21 8 8 8 8 8 11 25 25 28 28 28 24 24 30 41 59 59 36 36 36 36 50 50 53 53 53 59 59 37 37 30 30 30 28 30 30 37 30 30 30 42 42 57 48 50 50 50 50 47 47 47 51 51 68 68 59 57 57 57 57 57 57 57 57 57 53 53 53 53 53 57 59 59 59 57 53 53 50 50 50 59 41 25 19 11 13 10 11 10 9 9 8 8 8 10 16 17 36 36 36 39 39 43 48 48 53 53 57 53 53 47 47 47 47 48 48 50 57 59 59 59 59 68 68 68 68 68 68 68 57 57 59 59 57 54 50 68 68 50 50 48 54 54 57 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 46 44 42 47 35 35 35 39 35 37 37 39 42 42 48 48 59 59 59 59 59 59 59 57 57 57 57 57 48 48 48 47 59 47 48 47 47 34 29 22 10 8 8 8 8 8 8 8 12 10 11 11 16 12 12 11 9 9 9 8 8 8 8 8 10 14 24 34 41 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 53 50 50 50 50 41 27 23 11 11 10 16 10 10 10 13 16 9 9 9 10 10 11 11 11 12 12 12 12 15 15 20 23 24 41 59 59 59 41 41 38 34 36 39 39 41 41 46 46 46 48 48 48 48 48 50 48 57 57 48 48 48 48 48 47 47 50 50 50 50 59 57 48 57 48 48 48 57 48 43 37 32 30 40 40 46 39 42 42 43 43 41 30 30 30 32 43 59 59 59 59 48 48 57 59 59 59 59 57 48 43 37 37 37 37 37 37 37 37 39 28 28 39 39 39 41 41 39 39 31 32 30 24 22 12 12 14 26 20 37 25 25 25 25 39 39 41 41 39 39 23 23 24 24 24 25 18 28 28 21 20 19 16 10 10 12 23 26 41 41 37 19 11 10 14 14 15 37 33 24 24 19 17 10 14 18 24 19 23 23 32 24 28 32 37 39 36 36 21 16 15 12 14 19 27 30 22 17 13 11 19 12 18 20 26 28 37 23 22 10 10 10 19 10 10 13 24 26 30 29 29 18 18 12 9 8 8 8 9 11 8 9 8 10 10 16 19 29 30 33 37 37 24 20 18 19 14 8 9 9 10 10 10 10 11 12 10 10 12 17 22 18 22 20 19 19 9 9 8 10 8 8 9 9 8 12 7 6 8 10 10 10 8 8 8 8 12 19 14 18 12 11 13 13 14 14 10 10 12 14 16 13 11 11 11 11 12 10 10 10 10 10	Open. Hide. 12 12 19 23 32 33 37 37 37 37 48 48 50 59 59 57 57 57 57 48 48 48 48 48 40 36 36 36 40 42 48 42 42 42 48 48 50 50 50 47 51 57 57 54 57 59 59 50 50 50 50 50 50 57 57 57 47 47 50 50 50 50 51 50 46 46 57 57 68 46 48 46 46 46 48 50 50 50 68 68 50 50 50 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 54 57 59 57 57 57 57 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 57 57 57 57 57 59 59 59 59 59 59 62 59 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 57 57 57 57 57 57 59 57 57 57 59 59 59 59 59 59 59 59 59 59 59 68 68 59 59 59 59 59 59 57 57 57 57 68 68 68 59 59 57 68 68 68 57 57 43 43 43 59 59 59 59 57 59 59 68 68 59 59 59 59 59 59 59 68 68 68 68 57 57 59 59 59 68 68 68 68 68 68 59 59 59 59 59 59 59 68 59 59 59 59 48 41 41 41 41 41 41 47 47 59 59 68 59 59 57 59 48 50 50 50 48 48 48 48 57 59 59 59 59 59 59 59 48 59 59 59 59 47 34 28 16 11 10 9 10 11 12 12 16 14 15 12 12 12 10 11 11 11 11 11 11 11 9 11 12 18 33 36 59 59 59 50 50 50 50 50 50 50 57 57 57 57 57 57 53 53 48 48 46 46 37 34 15 12 8 9 7 8 8 11 7 6 6 6 8 8 11 13 19 29 37 31 37 21 18 16 16 13 9 8 8 8 8 8 10 8 10 8 8 8 9 10 10 10 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 14 14 15 12 10 10 8 8 8 8 8 8 19 21 24 15 10 8 6 6 8 8 8 8 10 8 8 7 6 12 10 10 10 10 10 9 9 9 9 21 18 18 12 12 12 16 11 12 10 10 10 10 11 11 11 10 9 8 8 8 8 8 7 8 12 14 17 15 13 11 10 9 9 10 10 8 8 8 8 8 8 8 8 10 9 9 9 9 8 8 6 6 10 8 9 9 9 8 8 8 6 6 8 8 9 9 9 9 9 8 10 8 6 6 8 6 8 10 10 8 10 8 8 8 10 8 8 8 12 10 17 15 12 10 10 8 8 8 8 8 10 12 15 14 12 12 8 8 6 6 6 8 8 8 8 8 8 8 7 8 8 10 10 10 10 8 8 8 8 8 8 8 8 10 10 13 11 13 11 11 11 11 15 12 14 10 12 10 10 10 14 8 8 6 6 8 8 10 11 9 9 9 9 10 9 8 9 14 12 9 10 11 11 9 8 8 8 8 8 8 15 10 8 8 9 9 9 8 10 6 6 8 8 8 8 6 6 8 8 10 18 15 11 9 9 11 11 11 13 14 10 10 10 11 15 17 17 16 23 11 12 8 8 8 8 15 11 9 8 8 8 8 12 8 11 11 14 19 18 11 11 10 10 10 10 15 13 11 11 11 11 13 9 10 9 9 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no158_m07.b1 MSMg01no158_m07.b1 CHROMAT_FILE:
MSMg01no158_m07.b1 PHD_FILE: MSMg01no158_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:21 2005
         (234 letters)



>mm_chr16_94966394_94967027
          Length = 634

 Score =  451 bits (233), Expect = e-131
 Identities = 233/233 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcttttattgttccagtcaaaaaaagaggaacgcctcaatatgtaaacagtttcccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttttattgttccagtcaaaaaaagaggaacgcctcaatatgtaaacagtttcccta 260

                                                                       
Query: 61  acacagcgatttcttaaatatatatatttatttattctaaaaaaatttggcattgtagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacagcgatttcttaaatatatatatttatttattctaaaaaaatttggcattgtagag 320

                                                                       
Query: 121 atttctcaatacataatttgtgctttcgcatcaggcatgctttcgccttgtccgtgcgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctcaatacataatttgtgctttcgcatcaggcatgctttcgccttgtccgtgcgca 380

                                                                
Query: 181 gacatacttggattgagtacagggagttacaaaaggatcggaaggtgggtcgg 233
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacatacttggattgagtacagggagttacaaaaggatcggaaggtgggtcgg 433


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no158_m07.g1 MSMg01no158_m07.g1 CHROMAT_FILE:
MSMg01no158_m07.g1 PHD_FILE: MSMg01no158_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:21 2005
         (289 letters)



>mm_chr16_95087512_95088200
          Length = 689

 Score =  507 bits (262), Expect = e-148
 Identities = 280/286 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagggagaaatcaggaaattagcaacctctagtgagaaagaaggcagaggttgtaccctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cagggagaaatcaggaaattagcaacctctagtgagaaagaaggcagaggttgtaccctt 427

                                                                       
Query: 61  ctgtgtgtgagagctgctgtttctggctgctgcttgaacttgctgtaggcagtacgctcc 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 426 ctgtgtgtgagagctgctgtttctggctgctgcttgaacttgctgttggcagtacgctcc 367

                                                                       
Query: 121 agaaaaaaaactactcctccacctctcacactggtttcaatagagtcttcatgaaaagca 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 366 agaaaaaaaactactcctccacctctcgcactggtttcaatagagtcttcatgaaaagca 307

                                                                       
Query: 181 aacagaattctctcacatcagaacttcaaggttttgtttttaaagtctcttaactctaaa 240
           |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 306 aacagaattctctcacatcagaacttcaaggtttcgtttttaaattctcttaactctaaa 247

                                                         
Query: 241 cacttagcaagggttttttgtgaatgtgtaaattccaagaacaata 286
           |||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 246 cacttaacaagggttttttgtgaatgtgtaaattcaaagaacaata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space:   190400
Effective search space used:   190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information