Query= MSMg01no159_d23.b1 MSMg01no159_d23.b1 CHROMAT_FILE:
MSMg01no159_d23.b1 PHD_FILE: MSMg01no159_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:56 2005
(319 letters)
>mm_chr16_9374582_9375299
Length = 718
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaggcatggaacctgttctggttctggctctggccagattttggaccccacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaggcatggaacctgttctggttctggctctggccagattttggaccccacat 264
Query: 65 aaaatattgcttcagccttagcttcagttttcctgcctgtcagtgagagcagtgtgatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaatattgcttcagccttagcttcagttttcctgcctgtcagtgagagcagtgtgatca 324
Query: 125 tccagaatcttctagctctaacatttcagagcttccaacgtggggaaagtgttggtgaca 184
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 tccacaatcttctagctctaacatttcagagcttccaacgtggggaaa-tgttggtgaca 383
Query: 185 atataaaccaaattgtctctaaatccatagatcaaatcgcttatctcccatgtggctgta 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 atataaaccaaattgtctctaaatccatagatcaaatcgcttgtctcccatgtggctgta 443
Query: 245 ttctttctttgacagtatcgtgtgtcacagactgaccttacactcgctgtgtagccaaga 304
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 ttctttctttgacagcatcgtgtgtcacagactggccttacactcgctgtgtagccaaga 503
Query: 305 atgcgcaagg 314
||||||||||
Sbjct: 504 atgcgcaagg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_d23.g1 MSMg01no159_d23.g1 CHROMAT_FILE:
MSMg01no159_d23.g1 PHD_FILE: MSMg01no159_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:56 2005
(287 letters)
>mm_chr16_9529684_9530370
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 atttctccattttcttttttcagtctgtcttgtaggaggagtaaagacaagaacctcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atttctccattttcttttttcagtctgtcttgtaggaggagtaaagacaagaacctcatt 428
Query: 61 ttcttttcttactactgattatctttgctttttgtagttaaatctggggaagcagagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcttttcttactactgattatctttgctttttgtagttaaatctggggaagcagagaga 368
Query: 121 aaaatttgcagctcaattttagcaaccagccaggaccatttagcacaaatttttctgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaatttgcagctcaattttagcaaccagccaggaccatttagcacaaatttttctgtgc 308
Query: 181 aaatttttgatttggcttattccctccatgtgaccatgttcagttggcctttgggtggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaatttttgatttggcttattccctccatgtgaccatgttcagttggcctttgggtggtg 248
Query: 241 gtataaaactttgatttagttaattagttattataatctattgaatc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtataaaactttgatttagttaattagttattataatctattgaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
