Query= MSMg01no159_e01.b1 MSMg01no159_e01.b1 CHROMAT_FILE:
MSMg01no159_e01.b1 PHD_FILE: MSMg01no159_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:56 2005
(350 letters)
>mm_chr16_52559295_52560048
Length = 754
Score = 600 bits (310), Expect = e-176
Identities = 342/354 (96%), Gaps = 4/354 (1%)
Strand = Plus / Minus
Query: 1 gaatgttgacatt-acgttactcctaagga---aaggatgcaattcatgacctatattct 56
||||||||||||| | ||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 554 gaatgttgacattaatgttactcctaaagaaagaaggatgtaattcatgacctatattct 495
Query: 57 agactctgttataaaattttatcttgctcacttttattcagtacatagtatgcatcatgt 116
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agactatgttataaaattttatcttgctcacttttattcagtacatagtatgcatcatgt 435
Query: 117 cttataatttgtgtaacatttaaaattataccttttacctctagttcaaagagctgagta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cttataatttgtgtaacatttaaaattataccttttacctctagttcaaagagctgagta 375
Query: 177 gcttactctttacattatagaaaatgaaaaactatacttaaatggaactctacattttaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcttactctttacattatagaaaatgaaaaactatacttaaatggaactctacattttaa 315
Query: 237 acccactatcaaccttaagctcttgagttcatacataaattataatgcttatgatgtata 296
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 acccactatcaaccctaagctcttgagttcatacataaattataatgcttatgatgtata 255
Query: 297 gagagagcagaagtatatgaaagccagaatattaatacatattaatatacataa 350
|||| ||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 254 gagaaagcagaagtatatgaaagccagaatattattacatatgaatatacataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 754
Length adjustment: 9
Effective length of query: 341
Effective length of database: 745
Effective search space: 254045
Effective search space used: 254045
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_e01.g1 MSMg01no159_e01.g1 CHROMAT_FILE:
MSMg01no159_e01.g1 PHD_FILE: MSMg01no159_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:56 2005
(598 letters)
>mm_chr16_52400370_52401367
Length = 998
Score = 1135 bits (587), Expect = 0.0
Identities = 593/595 (99%)
Strand = Plus / Plus
Query: 1 tcacaaaattaagggaaaaaaggaaaaagaatacttcttcattttttgatgttcttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacaaaattaagggaaaaaaggaaaaagaatacttcttcattttttgatgttcttttct 260
Query: 61 tcttccttctaggaataggttgcctactactagttccaacccagctgttaccgctgggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttccttctaggaataggttgcctactactagttccaacccagctgttaccgctgggat 320
Query: 121 cagaagtctagtataatttcttcctaatactcaccctgtacagttcagggtagatggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaagtctagtataatttcttcctaatactcaccctgtacagttcagggtagatggaat 380
Query: 181 attggcaccctctagctctgctaactccagagtaaagtccatcatgcaaaatgacccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attggcaccctctagctctgctaactccagagtaaagtccatcatgcaaaatgacccatg 440
Query: 241 ttgctatccatgtgagtatgttgcctattctgtacctagtagatgggtgaagaacttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgctatccatgtgagtatgttgcctattctgtacctagtagatgggtgaagaacttctt 500
Query: 301 agcatactgttaagaaagaggcttacataaagttgcttatataaagttgcttacattgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcatactgttaagaaagaggcttacataaagttgcttatataaagttgcttacattgct 560
Query: 361 tacataaagttgcccagtgggatttttgttctgcttgaccctctaaaacattgtggaaag 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 tacataaagttgcccagtgggatttttgttctgcttgaccctctaaaatattgtggaaag 620
Query: 421 attcattgtccaggtaatggaaaatctaaccagatggcggcaagcagtccatcttgccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcattgtccaggtaatggaaaatctaaccagatggcggcaagcagtccatcttgccct 680
Query: 481 ctcataagctctattctagggtaaagcctttctcaccattactttgaagttacatgaccc 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttataagctctattctagggtaaagcctttctcaccattactttgaagttacatgaccc 740
Query: 541 aataatttcacctttcaatgtgtgcgtgggtagacacacacacacacacacacac 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aataatttcacctttcaatgtgtgcgtgggtagacacacacacacacacacacac 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
