Query= MSMg01no160_m16.b1 MSMg01no160_m16.b1 CHROMAT_FILE:
MSMg01no160_m16.b1 PHD_FILE: MSMg01no160_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:51 2005
(306 letters)
>mm_chr16_78674020_78674725
Length = 706
Score = 524 bits (271), Expect = e-153
Identities = 294/303 (97%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 7 attcctagttgggcctcagtgggagatgatgtccttagatatgctgcaactggttgttcc 66
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 706 attcctagttgggcctcaatgggagatgatgtccttagatatgctgcaactggttgtccc 647
Query: 67 agggtggggtgataccaaaggggggcatccccttctctcaaaagaagagtgggtagt--- 123
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 646 agggtggggtgataccaaaggggggcatccccttctctcaaaagaagaatgggtagtcga 587
Query: 124 agaaggattggtaaatgcaggactgggaggagggaggaaagggggctgcaaccaggacgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 586 agaaggattggtaaatgcaggactgggaggagggaggaaagggggctgcaaccaggatgt 527
Query: 184 aaaataaatacatccataaattaattaactgaaaaaaattaaataaaattctctaaaagt 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaaataaatacatcaataaattaattaactgaaaaaaattaaataaaattctctaaaagt 467
Query: 244 tagagatggtgtcacagtaccatactcccagttacttgggatgctgaaacaggagggcca 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 466 tagagatggtgtcacagtaccatactcccagctacttgggatgctgaaacaggagggcca 407
Query: 304 caa 306
|||
Sbjct: 406 caa 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_m16.g1 MSMg01no160_m16.g1 CHROMAT_FILE:
MSMg01no160_m16.g1 PHD_FILE: MSMg01no160_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:51 2005
(282 letters)
>mm_chr16_78580383_78581063
Length = 681
Score = 491 bits (254), Expect = e-143
Identities = 272/282 (96%), Gaps = 8/282 (2%)
Strand = Plus / Plus
Query: 1 agtcgacctttcagtttatttgagagatactaatgggaaaacactgtattcggagccttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agtcgacctttcagtttatttgagagatactaatgggaaaacactgtatttggagccttc 260
Query: 61 ggtacagtaaggcacagtaatatgtgactctaatcatagaaaccattagaagcaggaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ggtacagtaaggcacagtaatatgtgactctaatcatagaaaccattagaagcag-aatc 319
Query: 121 tttaatgtcagaaacgcttcagaagattatgccaaaccaactattctctaggagaatcct 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 320 tttaatgtcagaaacgcttcagaagattatgccaaaccaactg-------ggagaatcct 372
Query: 181 agagatataactcaccaaccccaggaaacagcaagcgtagagatctcaggcctagtctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agagatataactcaccaaccccaggaaacagcaagcgtagagatctcaggcctagtctgt 432
Query: 241 gaggaactatgtttagccaacaacctgaaaaacttgggcttc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gaggaactatgtttagccaacaacctgaaaaacttgggcttc 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
