Query= MSMg01no162_d09.b1 MSMg01no162_d09.b1 CHROMAT_FILE:
MSMg01no162_d09.b1 PHD_FILE: MSMg01no162_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:31 2005
(683 letters)
>mm_chr16_37129082_37130163
Length = 1082
Score = 1158 bits (599), Expect = 0.0
Identities = 659/679 (97%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtggttttcaggaaaatggatgcagctggagattactatgttaaacaaatcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtggttttcaggaaaatggatgcagctggagattactatgttaaacaaatcag 264
Query: 65 attcagaacaacaggtattacatgtcctctctcatttgtgggctctagattttgtgtaaa 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 attcagaacaacaggtattatatgtcctctctcatttgtgggctctagattttatgtaaa 324
Query: 125 tacataaaagtattcacacacatacacaccatgtatataaaacatgaaataaaacctaga 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacataaaagtattcacacacacacacaccatgtatataaaacatgaaataaaacctaga 384
Query: 185 ttctctggagaaaccgaataataggaagagagggaggggagaaagaaaaatatatccaag 244
||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 385 ttctctggagaaaccaaataataggaagagagggaggggagaaa-aaaaatacatccaag 443
Query: 245 agtgcatatcatcaaagtatataatatacttgcataaaatgtcattataaagcctatctc 304
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 agagcatatcatcaaagtatataatgtacttgcataaaatgtcattataaagcctatctc 503
Query: 305 tatatataagaaacttatgttagtatgattaacacacaactccctacaatagaataaaca 364
| ||||||||||||||||| ||||||||||| | | |||||||||||||||||||||||
Sbjct: 504 tctatataagaaacttatgccagtatgattaaaataaaactccctacaatagaataaaca 563
Query: 365 ctttcaatccctatagtactataaatgaccattataatcagtttctcctactacttccat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctttcaatccctatagtactataaatgaccattataatcagtttctcctactacttccat 623
Query: 425 gtatacctaggagcacaataggaatttataggactacattgaagaatatatatttaaaac 484
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtatgcctaggagcacaataggaatttataggactacattgaagaatatatatttaaaac 683
Query: 485 atcttctaagaagaatatatttattgtctggctcaatgatactgtagcttatagatgtct 544
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 684 atcttctaagaagaatatatttattgtctggttcaatgatactgtggcttatagatgtct 743
Query: 545 ctatcctttttctctattaacaatcacatccatttatttctatcaaggaagtttacctac 604
||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 744 ctatcctttttctctattaacaatcacgtctacttatttctatcaaggaagtttacctac 803
Query: 605 ctgaatattatcacacatttcttggctatatgttaaccgttgaatttcagtgggagagac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctgaatattatcacacatttcttggctatatgttaaccgttgaatttcagtgggagagac 863
Query: 665 gaggtataatgcctgtcct 683
|||||||||||||||||||
Sbjct: 864 gaggtataatgcctgtcct 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_d09.g1 MSMg01no162_d09.g1 CHROMAT_FILE:
MSMg01no162_d09.g1 PHD_FILE: MSMg01no162_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:31 2005
(303 letters)
>mm_chr16_37279268_37279970
Length = 703
Score = 559 bits (289), Expect = e-164
Identities = 298/301 (99%)
Strand = Plus / Minus
Query: 1 cattgtgcagattcttcgaaaaccatcttggatcaagtttggtaatagaaaatcattgga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cattgtgcagattcttccaaaaccatcttggatcaagtttggtaatagaaaatcattgga 378
Query: 61 aaaagtaaaaagtattagtttaagtcaagctgtgttgctattggtgagtgtgattaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaaagtaaaaagtattagtttaagtcaagctgtgttgctattggtgagtgtgattaaagt 318
Query: 121 ccaacctatgcagctttagtgcatgtcaatacccatcagcagataagagcaaaagaatgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccaacctatgcagctttagtgcatgtcaatacccatcagcagataagagcaaaagaatga 258
Query: 181 acaaacataagtatcagtatttccccaggagttttctgttttccttaatatatttcctta 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 257 acaaacataagtatcagtatttccccaggagttttctgttttccttattatatttcctta 198
Query: 241 atatatttaatatattttaataaaaatatacttctcagaaattcttttttaatttaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atatatttaatatattttaataaaaatatacttctcagaaattcttttttaatttaaaat 138
Query: 301 a 301
|
Sbjct: 137 a 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
