Query= MSMg01no162_i15.b1 MSMg01no162_i15.b1 CHROMAT_FILE:
MSMg01no162_i15.b1 PHD_FILE: MSMg01no162_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:56 2005
(261 letters)
>mm_chr16_49143120_49143779
Length = 660
Score = 435 bits (225), Expect = e-126
Identities = 252/261 (96%), Gaps = 1/261 (0%)
Strand = Plus / Plus
Query: 1 taagaaatagcttgttctttgaacttttgcgatgaactatgcattgtgctaagtcccaac 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 taagaaatagcttgttctttgaacttttgccatgaactatgcattgtgctaagtcccaac 260
Query: 61 catataatttttaatgtattaatctggataacattgagatcaaactattaaattcaacaa 120
|||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 261 catataatttttaatgtattaatctggacaacattgagctcaaattattaaattcaacaa 320
Query: 121 gatgtttgtgtgggaaaaacagtacatgatctgctgtgccactagtttagtgtttgaatt 180
||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 321 gatgtttgtgtgggaaaaacagtacatgatccgctgtgtcattagtttagtgtttgaatt 380
Query: 181 tttatggttagaagcaattaatttaaaattcagtagattctatagctatgcataaaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatggttagaagcaattaatttaaaattcagtagattctatagctatgcataaaccaa 440
Query: 241 aagcattatttgataatggat 261
| ||| |||||||||||||||
Sbjct: 441 a-gcactatttgataatggat 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 660
Length adjustment: 9
Effective length of query: 252
Effective length of database: 651
Effective search space: 164052
Effective search space used: 164052
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no162_i15.g1 MSMg01no162_i15.g1 CHROMAT_FILE:
MSMg01no162_i15.g1 PHD_FILE: MSMg01no162_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:56 2005
(279 letters)
>mm_chr16_49305134_49305812
Length = 679
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%)
Strand = Plus / Minus
Query: 1 agaatcacagctggctctgattgtcaacgtaatgaaagttaaaaaattctggccagaccc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 478 agaatcacagctggctctgattgtcaacgtaatgaaagttaaataattctggccagaccc 419
Query: 61 aatcctcttctctgaaaagggcccagtgatcacttcaccaggaagccatgctttcagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 418 aatcctcttctctgaaaagggcccagtgatcacttcaccaggaagccatgctttcagctt 359
Query: 121 ctgctctcactttgatgaccaacctcatttgctcatccaaagcacgaagggccgccttta 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 358 ctgctctcactttgatgaccaacctcatttgctcatccaaagcatgaagggccgccttta 299
Query: 181 tctacacgcatgaaactccagaaagcagtccacactcgtggaaagggctgaattcaaact 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tctacatgcatgaaactccagaaagcagtccacactcgtggaaagggctgaattcaaact 239
Query: 241 atttaggttgctctaaggttctaataccttgtgatctc 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atttaggttgctctaaggttctaataccttgtgatctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
