NGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCACTAACCTACATTTGAATTGATTGTGGGTTTCCATATTG
ATCACTGTCAGTTACAAAGAGAAGTTCTTATGGGTATTTGCAATTACTAC
CAGCCAAGTACATCCTAGAAAGTTAGGAAATAAGTTTATCTGGTGTTTTG
ATAAAGAATGACACACACAAGTTCAAACATTTAAATGGTTGGTCATTACT
TGAGAAAGAGTAGTAGATATCGCCTTTTTGGAGAAAGAATGTCTCTAGGG
CTGGTGTTTGGGTTTCAAAAGCCCAAGCCAGGCAGAAAGTCTCTTTCTTC
CTCTTGCCTGCAGATCCAAATGCAGAACTCTCAAATAACTCTCCAGCACT
CTGTTTGCTGGCGTTCTGCTATGTTCCCCACAATGATGAAAAATGACTAA
ACCTCTGAATCTTTAAGCAAACCACAATTAAATGTTTTTATTTTAAGAGT
TATTGTGGTCATGTTGTCTCTTCACAGCAGTAGAAAACTGATTAGGACTC
CATACAAAAACTCATGAAAAAACACAACTCTACATGGCTAAATATGTGGT
ATAGGTATTTTTAGGGAGGAGAACCCCCTGCTGTATTTCATTCTATCACT
TACTCGCCCACATATTGTCCCCCCCGTTCATTTAGTATCCCCCCCACCCA
CTTATTACCCCGCTTTTTTTTTTCTCTCTTTACT

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAATCTCTTTAATATTAAGA
TGACTTGTAATTGCAATAATAAATGTATCAAAGCTTCAATTACAGTGATT
TTTAGCAACACAGATGGAAACTCTTCATATATTAATGCATACATTTACCA
TAAACGCATAAAGTAAATGCAAGTACTTTTATTTCTATATCCATTAAGGA
CTTACCTAGATCATCTAAATAATTATAAGTATAATTTTTCATGAAAAAAA
TTGTGGATCTGAAAATTTTAATACAACTGCCATTTGAAACTTTTCAAAAT
TTTATTGTTGAGAATTATATAGTTTCAAGAAAGGTTTTAGGATACAGATA
TGATATGAATAAAATTTTAAAAAACCACAAGCTTATTATCTGGAAATGTC
ATGAGCAAAAAAGACATTAGAACACTCCTAGAAATGGTAAGAAGCTCAAC
CCATGCTGTCTTAACACTGGTTTTCCAAGGCTGACCTATAGACTGGTTGT
TAAGAACAGCTGAGAAAAGGAGAGATAGTCTTTGTCAGAAATTAGCATCT
TATTTTTTTATGCAGTGCCAAGTGGTCAGTCCTGACTTCATATATCACAG
GTAACACAAAATAACATTAGCAGGTTGCAAACATTTTTCAGTATGTGTAT
CTTTCATATATATATATATGGATATATATATATATATATA

Query= MSMg01no166_g01.g1 MSMg01no166_g01.g1 CHROMAT_FILE:
MSMg01no166_g01.g1 PHD_FILE: MSMg01no166_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:51 2005
         (661 letters)



>mm_chr16_61244134_61245194
          Length = 1061

 Score = 1098 bits (568), Expect = 0.0
 Identities = 651/710 (91%), Gaps = 52/710 (7%)
 Strand = Plus / Minus

                                                                       
Query: 1   taaatctctttaatattaagatgacttgtaattgcaataataaatgtatcaaagcttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 taaatctctttaatattaagatgacttgtaattgcaataataaatgtatcaaagcttcaa 800

                                                                       
Query: 61  ttacagtgatttttagcaacacagatggaaactcttcatatattaatgcatacatttacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttacagtgatttttagcaacacagatggaaactcttcatatattaatgcatacatttacc 740

                                                                       
Query: 121 ataaacgcataaa---------gt--------------------------aaat------ 139
           |||||||||||||         ||                          ||||      
Sbjct: 739 ataaacgcataaactaaatgccgtcaataataatatgaaaattaaaaatcaaatggctga 680

                                                                       
Query: 140 --------gcaagtacttttatttctatatccattaaggacttacctagatcatctaaat 191
                   |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 tgaatagagcaagtacttttatttgtatatccattaaggacttacctagatcatctaaat 620

                                                                       
Query: 192 aattataagtataatttttcatgaaaaaaattgtggatctgaaaattttaatacaactgc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 619 aattataagtataatttttcatgaaaaaaattgtggatctgaaaattttaatataactgc 560

                                                                       
Query: 252 catttgaaacttttcaaaattttattgttgagaattatatagtttcaagaaaggttttag 311
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 559 catttgaaacttttcaaaattttattgttgagaattatatagttttaagaaaggttttag 500

                                                                       
Query: 312 gatacagatatgatatgaataaaattttaaaaaaccacaagcttattatctggaaatgtc 371
           ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||
Sbjct: 499 gatacagatatgatatgaataaaattaaaaaaaaacacaagcttattatctggaaatgtc 440

                                                                       
Query: 372 atgagcaaaaaagacattagaacactcctagaaatggtaagaagctcaacccatgctgtc 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atgagcaaaaaagacattagaacactcctagaaatggtaagaagctcaacccatgctgtc 380

                                                                       
Query: 432 ttaacactggttttccaaggctgacctatagactggttgttaagaacagctgagaaaagg 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttaacactggttttccaaggctgacctatagactggttgttaagaacagctgagaaaagg 320

                                                                       
Query: 492 agagatagtctttgtcagaaattagcatcttatttttttatgcagtgccaagtggtcagt 551
           |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 319 agagttagtctttgtcagaaattagcatctta-ttttttatgcagtgccaagtggtcagt 261

                                                                       
Query: 552 cctgacttcatatatcacaggtaacacaaaataacattagcaggttgcaaacatttttca 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cctgacttcatatatcacaggtaacacaaaataacattagcaggttgcaaacatttttca 201

                                                             
Query: 612 gtatgtgtatctttcatatatatatatatggatatatatatatatatata 661
           |||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 200 gtatgtgtatctttcatatatatatatat--atatatatatatatatata 153


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)