Query= MSMg01no167_c08.b1 MSMg01no167_c08.b1 CHROMAT_FILE:
MSMg01no167_c08.b1 PHD_FILE: MSMg01no167_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:50 2005
(661 letters)
>mm_chr16_74904876_74905935
Length = 1060
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Minus
Query: 7 ggaattcagatccttccttcttaatgtgacatgtgtntctgacctaaaaaacagaattta 66
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 857 ggaattcagatccaaccttcttaatgtgacatgtgt-tctgacctaaaaaacagaattta 799
Query: 67 caagaaacataaatattgcgagatggaaaggaaggataacaatctgaaaggattacaaat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 caagaaacataaatattgcgagatggaaaggaaggataacaatctgaaaggattacaaat 739
Query: 127 ttccacaggtaattagtcactcagttgcttgcttttgcttaattatcgagtcaagctcag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttccacaggtaattagtcactcagttgcttgcttttgcttaattatcgagtcaagctcag 679
Query: 187 gtgttctcttcttattttaaaagaccaggttttattcatttggtgtttgtttaattcatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtgttctcttcttattttaaaagaccaggttttattcatttggtgtttgtttaattcatt 619
Query: 247 ttggtgttttaacaccaaggtaacaaatatgtaaatcatgatatcattttaaataagata 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttggtgttttaacaccaaggtaacaaatatgtaaatcatgatatcattttaaataagata 559
Query: 307 tgggatttactcttaacaagatggtatgagaagaaataatttaagtatatgtatgcatgt 366
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgggatttacttttaacaagatggtatgagaagaaataatttaagtatatgtatgcatgt 499
Query: 367 gtgtctacatattgactgaatttttttccttgcacactttaaagatttccacagtgtgac 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtgtctacatattgactgaatttttttccttgcacactttaaagatttccacagtgtgac 439
Query: 427 aggcaagcctgttgtgtactggtagccaagagtactttcagtataaggtatagaagtctt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggcaagcctgttgtgtactggtagccaagagtactttcagtataaggtatagaagtctt 379
Query: 487 tatctttgggtataggtatgtgtggatatgtttataatttatttaccaagtgtgtgaatt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatctttgggtataggtatgtgtggatatgtttataatttatttaccaagtgtgtgaatt 319
Query: 547 gtttcatctcagttcagttcctcactaggtgaaataaatatgaacggtaggaacacaagg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtttcatctcagttcagttcctcactaggtgaaataaatatgaacggtaggaacacaagg 259
Query: 607 ttcagtaagggtgaaggaagaagttaattgaagtttgatatgcttactgtgg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcagtaagggtgaaggaagaagttaattgaagtttgatatgcttactgtgg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1060
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1050
Effective search space: 683550
Effective search space used: 683550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_c08.g1 MSMg01no167_c08.g1 CHROMAT_FILE:
MSMg01no167_c08.g1 PHD_FILE: MSMg01no167_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:50 2005
(662 letters)
>mm_chr16_74757864_74758926
Length = 1063
Score = 1162 bits (601), Expect = 0.0
Identities = 649/667 (97%), Gaps = 7/667 (1%)
Strand = Plus / Plus
Query: 1 attcctcaggacactgagatctcaatgcaggaaggaaaacatacaatggaaaagtcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctcaggacactgagatctcaatgcaggaaggaaaacatacaatggaaaagtcaaat 260
Query: 61 ttaaatagatcatgaagcagcgaagaagtaaaaaatgtaacacaagagcaatttacctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatagatcatgaagcagcgaagaagtaaaaaatgtaacacaagagcaatttacctat 320
Query: 121 aatttaatcaccctgctttttttt-aaagcaatatgtccttatttaaaagcatataagaa 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttaatcaccctgcttttttttaaaagcaatatgtccttatttaaaagcatataagaa 380
Query: 180 catcacataccaccctaaagtacaaagattccaaaatgtccagaaaatccttcagctgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcacataccaccctaaagtacaaagattccaaaatgtccagaaaatccttcagctgcc 440
Query: 240 agaggtaaaacgtgtgtgtgcgtgtg--cgcgcgcacgcatgtatgtgcatatcgctgat 297
|||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||
Sbjct: 441 agaggtaaaacgtgtgtgtgcgtgtgtacgcgcgca--catgtatgtgcatatctctgat 498
Query: 298 atatatatacacacatacat--acatacatacatcatactggacactatcaacttccagt 355
||||||||| | | |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 499 atatatatatatatatacatacacatacatacatcatactggacactattaacttccagt 558
Query: 356 atcatagtataatatatagatacttatacatattgataacaatatcctagatcaagtttc 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 559 atcatagtataatatatagatacttatacatattgataacaatatcctagatcaaggttc 618
Query: 416 tcaacctgtggattacaactcctatggggggccaaatgatcctttcactggagtcacatg 475
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 619 tcaacctgtggattacaactcctatggggggccaaatgaacctttcactggagtcacatg 678
Query: 476 aaaccattataaaacagatgtgtatattatgattcacaacagttgcaaggttacagttat 535
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 679 aaaccattataaaacagatgtgtatattacgatttacaacagttgcaaggttacagttat 738
Query: 536 gaaatagcaacaaaaataattttttggatgcaggccagcccaacatgagcaactgtattg 595
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 739 gaaatagcaacaaaaataattttttggatgcaggtcagcccaacatgagcaactgtattg 798
Query: 596 aagggtcccagaattagggagattcagcaccagttgtctatatactctctgctctaaata 655
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aagggtcctagaattagggagattcagcaccagttgtctatatactctctgctctaaata 858
Query: 656 aaaatgt 662
|||||||
Sbjct: 859 aaaatgt 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
