Query= MSMg01no170_h19.b1 MSMg01no170_h19.b1 CHROMAT_FILE:
MSMg01no170_h19.b1 PHD_FILE: MSMg01no170_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:27 2005
(318 letters)
>mm_chr16_82734168_82734884
Length = 717
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattcctattttacattagctataaaggcaatggttggtaaaactcataataaaaagtt 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcctattttacattagctataaaggcaatg-ttggtaaaactcataataaaaagtt 263
Query: 65 ggcttttctatattaaaatctgcacatcttgcaaacaagaatccaaaaagttttcaattc 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 ggcttttctatattaaaatctgcacatcttgcaaacaagaatccaaaaagctttcaattc 323
Query: 125 acaaggttggatatctcacctcctcttcagtatatgccaaaattctgaagacgtaggctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaaggttggatatctcacctcctcttcagtatatgccaaaattctgaagacgtaggctt 383
Query: 185 gaatggcagcgaatgaatgtacttgccagatcgaatgtctcacctcaaaagatctggatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaatggcagcgaatgaatgtacttgccagatcgaatgtctcacctcaaaagatctggatt 443
Query: 245 acaagtggttctttccatttcaaagtatttaattaaaaaaatcctggcacagatttgcca 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 acaagtggttctttccatttcaaagtatttaattaagaaaatcctggcacagatttgcca 503
Query: 305 agtcacttgg 314
||||||||||
Sbjct: 504 agtcacttgg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_h19.g1 MSMg01no170_h19.g1 CHROMAT_FILE:
MSMg01no170_h19.g1 PHD_FILE: MSMg01no170_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:27 2005
(289 letters)
>mm_chr16_82826334_82827022
Length = 689
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 actggaaattgatgtacctaagctgaaccataagtgaactgaggcaagctcattatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actggaaattgatgtacctaagctgaaccataagtgaactgaggcaagctcattatttct 285
Query: 61 gaaccagaataaaaatctcaaccacgcctatgtacagcttatcgcagaagaactaaaaat 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 284 gaaccagaataaaaatctcaaccactcctatgtacagcttatcgcagaagaactaaaaat 225
Query: 121 tagattgctttaggaaataaaatcgtcttggtttgaattgtattgctgtgaaaagacccc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tagattgctttgggaaataaaatcgtcttggtttgaattgtattgctgtgaaaagacccc 165
Query: 181 atgaccaaggcaacatttaattgggtcttgcttacaggttcagagagaggttcagtctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgaccaaggcaacatttaattgggtcttgcttacaggttcagagagaggttcagtctat 105
Query: 241 tttcatcaaggaggtaagcatgatgttgtttaggcatgcttggtgcta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tttcatcaaggaggtaagcatgatgttgtttaggcatgcttggtgcta 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
