CCTCCCCCNNNCCTCTTATTTGGGCGCTATAGACTCCTTAGGGAGAGGTC
CGCGGATTCAGTGTTAATTAGCAGGCACAATGTTTTGTAAAATTTAAAAG
GGGGTTTTGGGGTTTTCCCTTTTTTTTTTATTACGGTAATTAACACGCCT
AGTCAAGCTAGCATGATGGTGATAAGATGGTATGATAGGTTTGATGGCAA
TCTTTTTTCTTTTTCTTTTCCTTTTTTTCTCTTTTTTTCTCTTTTTTTCT
TCCTCTTTTTTTTCTTTTTTTCTACTCTTCTTTTCTCTCTTTTTTTCTCT
CCTTTTCTTCTTTTTTTTTTCTTTCCTCCCTTCTCTCTTTCCTTTTTTTT
CTCTCTTTTCTTTTTTCATCTTCTCTTTCTTTTTAGTATTCTCCCCCCCC
CCCCCCCCTTTATTTTTTTTTTTTTATTTCTTTGTGCATCCCCCCCCCCA
AAATAAAAAAAAATATTCTCGTTTGCGTTTTTTTTTTTCCTTCCTCCCCC
TTTTTTACCCTTTTTCCCTTTTCTTTTCTCTCTTCCCCCTTTTTTCTTCA
CCTTTTTTTTTTTTATTCCCCTTTCCTTTTTTTTTTTTTTTTTCCTTT

GATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAGGGGTTTAAAGTCATAATTCAAT
GCTCAGACCTCTGAATACATATCCTAATAATTCATCAAAATGAACTAAGT
GGGAATTCTCCCTCTTTAAACAATGGAATATTAGAAGCTTTTAATATTTC
ATACACAAGTGTGTGCATTACCAAATCCTAGAGCTAATAAAGATGGCTCT
AATGCTTCCAACTAATATTTTCAATACTCTGTAAAATAATCAATTTGTTC
AATTTTAAACAGCATAGTTCCATAAATGAGGTATTTGGCATGGAACCTGA
TTTAAAATGCATTCCTTTTTCGAGTGATTGAACCATTGTAATGAGAATTT
ATAATTTGTAGTGTATTACAGAAGGAAATGAATTGAACTTCTCTATCAAA
ATTATTCATGGATCAAAATCTTTCTTTGCTCGAACACACAGAAACTGGCA
GACAAATGCAATTACATTAGATAGGCTGCCATCCAGAACAACTGAAGAAT
GCTATTTATCCGATCTTGGCAATTTAAGCTTACCCTGCTACCGTAGCCAA
GTACAGACACCAGGCCATGACCATCACATTAGTACCACGAGGCTATCCCA
AATGTCATTGCTGGAAATCAATAGAGTTTTATTGGGTCCAGGCTATTACA
TTTGAACACAATTGTCAAAATN

Query= MSMg01no172_p04.g1 MSMg01no172_p04.g1 CHROMAT_FILE:
MSMg01no172_p04.g1 PHD_FILE: MSMg01no172_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:31 2005
         (646 letters)



>mm_chr16_50769258_50770303
          Length = 1046

 Score = 1226 bits (634), Expect = 0.0
 Identities = 643/646 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcaggggtttaaagtcataattcaatgctcagacctctgaatacatatcctaataattca 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 846 tcaggggtttaaagtcataattcaatgctcagacctccgaatacatatcctaataattca 787

                                                                       
Query: 61  tcaaaatgaactaagtgggaattctccctctttaaacaatggaatattagaagcttttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tcaaaatgaactaagtgggaattctccctctttaaacaatggaatattagaagcttttaa 727

                                                                       
Query: 121 tatttcatacacaagtgtgtgcattaccaaatcctagagctaataaagatggctctaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tatttcatacacaagtgtgtgcattaccaaatcctagagctaataaagatggctctaatg 667

                                                                       
Query: 181 cttccaactaatattttcaatactctgtaaaataatcaatttgttcaattttaaacagca 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 666 cttccaactaatattttcaatactctgtaaaataatcaatttgtccaattttaaacagca 607

                                                                       
Query: 241 tagttccataaatgaggtatttggcatggaacctgatttaaaatgcattcctttttcgag 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 606 tagttccataaatgaggtatttggcatggaacctgatttaaaatgcattcttttttcgag 547

                                                                       
Query: 301 tgattgaaccattgtaatgagaatttataatttgtagtgtattacagaaggaaatgaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgattgaaccattgtaatgagaatttataatttgtagtgtattacagaaggaaatgaatt 487

                                                                       
Query: 361 gaacttctctatcaaaattattcatggatcaaaatctttctttgctcgaacacacagaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaacttctctatcaaaattattcatggatcaaaatctttctttgctcgaacacacagaaa 427

                                                                       
Query: 421 ctggcagacaaatgcaattacattagataggctgccatccagaacaactgaagaatgcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctggcagacaaatgcaattacattagataggctgccatccagaacaactgaagaatgcta 367

                                                                       
Query: 481 tttatccgatcttggcaatttaagcttaccctgctaccgtagccaagtacagacaccagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttatccgatcttggcaatttaagcttaccctgctaccgtagccaagtacagacaccagg 307

                                                                       
Query: 541 ccatgaccatcacattagtaccacgaggctatcccaaatgtcattgctggaaatcaatag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccatgaccatcacattagtaccacgaggctatcccaaatgtcattgctggaaatcaatag 247

                                                         
Query: 601 agttttattgggtccaggctattacatttgaacacaattgtcaaaa 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agttttattgggtccaggctattacatttgaacacaattgtcaaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)