Query= MSMg01no172_p18.b1 MSMg01no172_p18.b1 CHROMAT_FILE:
MSMg01no172_p18.b1 PHD_FILE: MSMg01no172_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:34 2005
(320 letters)
>mm_chr16_24207229_24207947
Length = 719
Score = 565 bits (292), Expect = e-165
Identities = 310/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattccttaagtatattctgacgtatttgcccaaagagatgttatggggttagaagtta 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttaagta-attgtgacgtatttgcccaaagagatgttatggggttagaagtta 263
Query: 65 aagtgaatgaactcaggctaagtcaggtatcaatattgccatgcctaaagaaacaatgtt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 aagtgaatgaactcaggctaagtcaggtatcaatattgccatgcctaaagaaacaaggtt 323
Query: 125 aaaaggggggaaaaagctattttcagaataagtcagtattatatcattcctggaatgttt 184
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 aaaaggggggaaaaagttattttcagaataagtcagtattatatcattcctgaaatgttt 383
Query: 185 gaaacataaaacaatgctctacattgtcctgggtacttatggaggaaatgaaccaaacat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 gaaacataaaacaatgctctacattgtcctgggtacttatggaggaaatgaaccaaacgt 443
Query: 245 ggacaggacatgaccacataaacacatcaactttgggatgataattgcactggaggtgag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggacaggacatgaccacataaacacatcaactttgggatgataattgcactggaggtgag 503
Query: 305 ggggaagagagaaaga 320
||||||||||||||||
Sbjct: 504 ggggaagagagaaaga 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_p18.g1 MSMg01no172_p18.g1 CHROMAT_FILE:
MSMg01no172_p18.g1 PHD_FILE: MSMg01no172_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:34 2005
(289 letters)
>mm_chr16_24361199_24361887
Length = 689
Score = 466 bits (241), Expect = e-136
Identities = 283/315 (89%), Gaps = 28/315 (8%)
Strand = Plus / Minus
Query: 1 acacctgggggtgccagggcagcattgatggcctgagttcaatccctacccctcaagatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 653 acacctgggggtgccagggcagcattgatggcctgagttcaatccctaagcctcaagatg 594
Query: 61 tagaagagagataactgcaagttatcttctggcctccacttgcatgcacatgtgcacag- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tagaagagagataactgcaagttatcttctggcctccacttgcatgcacatgtgcacaga 534
Query: 120 ---------------------------acacacacacgcacacgcacacgcacatatgta 152
|||||||||| |||||||||||||||| |||||
Sbjct: 533 cacacacacacacacacacacacacacacacacacacacacacgcacacgcacacatgta 474
Query: 153 tgtacacatgcccacacacatatattctttgaatatcatacatgtacatatgtgttttga 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgtacacatgcccacacacatatattctttgaatatcatacatgtacatatgtgttttga 414
Query: 213 tcagggattccaagcttgttccatgtgttaggaacttgacgtatgcctgtgggcaggtag 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcagggattccaagcttgttccatgtgttaggaacttgacgtatgcctgtgggcaggtag 354
Query: 273 ctcactctgaggcta 287
|||||||||||||||
Sbjct: 353 ctcactctgaggcta 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
