Query= MSMg01no173_k06.b1 MSMg01no173_k06.b1 CHROMAT_FILE:
MSMg01no173_k06.b1 PHD_FILE: MSMg01no173_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:21 2005
(626 letters)
>mm_chr16_77783177_77784203
Length = 1027
Score = 1044 bits (540), Expect = 0.0
Identities = 543/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Minus
Query: 84 attaatattatgatatattcatgaatctaatgtttgtattatgtattgttttgctttgta 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 attaatattatgatatattcatgaatctaatgtttgtattatgtattgttttgctttgta 968
Query: 144 ttgggacaggggttcttcctgtatccctggctgttctagaatgcactctgtagatcagac 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ttgggacaggggttcttcctgtatccctggctgttctagaatgcactctgtagatcagac 908
Query: 204 tggtcttgaactcacaaatatacatctgcctctgcctcctgaatgctgggattaaaggca 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tggtcttgaactcacaaatatacatctgcctctgcctcctgaatgctgggattaaaggca 848
Query: 264 ttatgccaccactgcctggcataaacccagttaattttgtcctcttgtttatccctggtc 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ttatgccaccactgcctggcataaacccagttaattttgtcctcttgtttatccctggtc 788
Query: 324 tcatggaaaatatctgctttcatttcttttgtcaactctagaccagttctaatgactctt 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tcatggaaaatatctgctttcatttcttttgtcaactctagaccagttctaatgactctt 728
Query: 384 aagaatagtta-ttttttagctgtcaggatttgagtttcaatagaaccagtaatctaaat 442
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aagaatagttatttttttagctgtcaggatttgagtttcaatagaaccagtaatctaaat 668
Query: 443 tatgctttatgtagtattttctacaaaattctttaccaaaataaagatgtttcaaattca 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatgctttatgtagtattttctacaaaattctttaccaaaataaagatgtttcaaattca 608
Query: 503 attttctgacacatctgaatttctttccaaaaactagagcaaggaacttaattgaaaaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 attttctgacacatctgaatttctttccaaaaactagagcaaggaacttaattgaaaaaa 548
Query: 563 ttgagagttttactttttattttgtctccatgaatgtattacatgaattagaaagaggga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttgagagttttactttttattttgtctccatgaatgtattacatgaattagaaagaggga 488
Query: 623 ataa 626
||||
Sbjct: 487 ataa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_k06.g1 MSMg01no173_k06.g1 CHROMAT_FILE:
MSMg01no173_k06.g1 PHD_FILE: MSMg01no173_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:21 2005
(287 letters)
>mm_chr16_77625114_77625800
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Plus
Query: 1 atatagtattcaggacttggtctttccttttcttgttcatgtgaaatatggctggctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 atatagtattcaggacttggtctttccttttcttgttcatgtgaaatatggttggctata 260
Query: 61 tctacttagagcatggatgcaataatttttgcaatattacattttatactgtgttcaatt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctacttagagcatggatgaaataatttttgcaatattacattttatactgtgttcaatt 320
Query: 121 catatactatatactgcaattattagtcttccctcttttaggtactcattagctgaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catatactatatactgcaattattagtcttccctcttttaggtactcattagctgaaaac 380
Query: 181 agtccatctgatggctggttgtatctgtatatttcctggtcaggaaagtagatgtctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 agtccatctgatggctggttgtatctgtatatttcctggtcaggaaagtagatgtgtgaa 440
Query: 241 tagacattaggtggtgtttcttacagctgtgctatgcacaggtggta 287
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgacattaggtggtgtttcttacagctgtgctatgcacaggtggta 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
