Query= MSMg01no173_o12.b1 MSMg01no173_o12.b1 CHROMAT_FILE:
MSMg01no173_o12.b1 PHD_FILE: MSMg01no173_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:39 2005
(238 letters)
>mm_chr16_50901305_50901942
Length = 638
Score = 406 bits (210), Expect = e-118
Identities = 228/236 (96%), Gaps = 6/236 (2%)
Strand = Plus / Plus
Query: 5 gaattctggaatta---tccgattatcacaaaaataatcaaagagttaggaaatggatct 61
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggaa--agactc-gattatcacaaaaataatcaaagagttaggaaatggatct 261
Query: 62 acagaaattataattctcaatataattacgacaaaaccattgccacgtgacgactcataa 121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acagaaattataattctaaatataattacgacaaaaccattgccacgtgacgactcataa 321
Query: 122 aagattgaatatatgttgtcatagatagaactttgcactaatgttatgcaatggtataga 181
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatattgaatatatgttgtcatagatagaactttgcactaatgttatgcaatggtataga 381
Query: 182 taggtcataaagtgagtgagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 taggtcataaagtgagtgagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no173_o12.g1 MSMg01no173_o12.g1 CHROMAT_FILE:
MSMg01no173_o12.g1 PHD_FILE: MSMg01no173_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:39 2005
(234 letters)
>mm_chr16_50992127_50992760
Length = 634
Score = 414 bits (214), Expect = e-120
Identities = 229/234 (97%)
Strand = Plus / Minus
Query: 1 aaggaaaggagcggtgagctcagaaactcaccgcttactcatttggataagaggccttgc 60
|||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct: 434 aaggaaaggagcggtgagctcagaaactcatctcttactcattcggataagaggccttgc 375
Query: 61 tcatcacagtgaggttttgacatgcagccacagcagcggtgagttcatctcctggattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 374 tcatcacagtgaggttttgacatgcagccacagcagcggtgagttcatctcctagattct 315
Query: 121 ctttgtccactggaaaaggcccttttcacagaagctctttctgtggttctatcattaaat 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctttgtccactggaaaaggtccttttcacagaagctctttctgtggttctatcattaaat 255
Query: 181 tgtaacaaaatctctcatttttcagactcatggaggtacagcttataaaaagtg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtaacaaaatctctcatttttcagactcatggaggtacagcttataaaaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
