TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACTGTAGACTTAAAACCAAATGTAAGTTTCAAGATACTTTGGAG
AAATGCTTATTATCCAAAGCTGTCTACTGCTTTATAAGTGGCCACTGCTC
ATCTGAATTTAGCCATCACGATGGTCTCATGGGATTAATTCTTTGGGTTA
TAGATGCTGTCCCAGTTTGGAGGCATATGCTAATTTTACCTCTTCAGCAA
AATCTTAGAACACTATTCATTTTAATACATCTTAATTTCTTATAGCCTTG
ACAATGGAGCATGTTATCATACTTGTACATTTTCTTTGGTCTAATGCTTA
TGAATATTTTTTTTTCCCCCTTCTTCCCCGTTTCTCTAACTGGAAGTTAC
CGTATCTCTCACTACGCTTAAAAATAACTTTATACCTTTTATGTGAGAAT
TATCTTCCCATTTTTTGTGCATTTTTAATCATATATTGTGAGTTGCTTGC
CCTTTGATATCTAGTTCTCATATATTTGTTATTCAGCTTTCTTATATTAT
AAGTATTATCCCTTTGAGATGTATACGTCTACGATTTCCAACCCTTTATT
TTTCTTTGGACCTCCCTTACGATTTTTTTTTTTTTATTCCCCCACTCCCC
ACCACCTTTGTATATTTCTTATTTCTTGCTCTCCCGCCCCCGCTTCCACT
TTTATTCTCTCCTTAATTATTTTTTACTGTCCTTCCTAT

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATTGCATTTTGTTGTTAAAATCA
CGGTTATAAATGTGATCTTTTAAACTAACATTATTTCCCCACTAGTTGTG
TATTTCTCTAGTAGCATAGCTGACTTTTGTATGCTTATTTTATATCCTAA
CATTGTGTTATATTAATTTTACTTCCATTTGTTTAATTACCTTGGACCTT
CCTGTTGATAACATTGAACATCTATGGATAATTGATTTTTTTCTTTTATT
GAAAATAGGTTTCTTTTCTCACCTAATACATGTTGATTACAGTTTATCCT
CCCTCTACTTTCTCCAGTTCCTCTCCACTCCCCTCCATCTGGAACCACTT
CCTTTCTGTCTCTCATTACAAAACAAACAGGTTTCTATGGCATCATAATA
ATAATATAAAAAACTCTCTAGAATAGGATAAAATAAACATAAAGAAAATT
TACCAAAGAAAGTCACAAGAAATAAATATAAATACTCGTTAGCAATCTCA
GGACTTCCATAAAAATACTAAACTGGAAGCCATAATATATATTCAAAGGA
CTTGTAGGGCAAAAAGAGAGAACATAATATTATACATGAGAATATGGTAT
TATATATGAGAAATATATATTTTAAAAAGATAACATTTCTAATTTATTTA
TTTATTTATTATTAGACATTTTCTTTATATACTTT

Query= MSMg01no174_m13.b1 MSMg01no174_m13.b1 CHROMAT_FILE:
MSMg01no174_m13.b1 PHD_FILE: MSMg01no174_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:44 2005
         (313 letters)



>mm_chr16_39521237_39521949
          Length = 713

 Score =  596 bits (308), Expect = e-175
 Identities = 308/308 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctactgtagacttaaaaccaaatgtaagtttcaagatactttggagaaatgctta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctactgtagacttaaaaccaaatgtaagtttcaagatactttggagaaatgctta 264

                                                                       
Query: 65  ttatccaaagctgtctactgctttataagtggccactgctcatctgaatttagccatcac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttatccaaagctgtctactgctttataagtggccactgctcatctgaatttagccatcac 324

                                                                       
Query: 125 gatggtctcatgggattaattctttgggttatagatgctgtcccagtttggaggcatatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggtctcatgggattaattctttgggttatagatgctgtcccagtttggaggcatatg 384

                                                                       
Query: 185 ctaattttacctcttcagcaaaatcttagaacactattcattttaatacatcttaatttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaattttacctcttcagcaaaatcttagaacactattcattttaatacatcttaatttc 444

                                                                       
Query: 245 ttatagccttgacaatggagcatgttatcatacttgtacattttctttggtctaatgctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatagccttgacaatggagcatgttatcatacttgtacattttctttggtctaatgctt 504

                   
Query: 305 atgaatat 312
           ||||||||
Sbjct: 505 atgaatat 512


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space:   214016
Effective search space used:   214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no174_m13.g1 MSMg01no174_m13.g1 CHROMAT_FILE:
MSMg01no174_m13.g1 PHD_FILE: MSMg01no174_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:44 2005
         (301 letters)



>mm_chr16_39570961_39571661
          Length = 701

 Score =  574 bits (297), Expect = e-168
 Identities = 300/301 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattgcattttgttgttaaaatcacggttataaatgtgatcttttaaactaacattattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cattgcattttgttgttaaaatcacggttataaatgtgatcttttaaactaacattattt 351

                                                                       
Query: 61  ccccactagttgtgtatttctctagtagcatagctgacttttgtatgcttattttatatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ccccactagttgtgtatttctctagtagcatagctgacttttgtatgcttattttatatc 291

                                                                       
Query: 121 ctaacattgtgttatattaattttacttccatttgtttaattaccttggaccttcctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctaacattgtgttatattaattttacttccatttgtttaattaccttggaccttcctgtt 231

                                                                       
Query: 181 gataacattgaacatctatggataattgatttttttcttttattgaaaataggtttcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gataacattgaacatctatggataattgatttttttcttttattgaaaataggtttcttt 171

                                                                       
Query: 241 tctcacctaatacatgttgattacagtttatcctccctctactttctccagttcctctcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 170 tctcacctaatacatgttgattacagtttatcctccctctactttctccaggtcctctcc 111

            
Query: 301 a 301
           |
Sbjct: 110 a 110


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space:   202064
Effective search space used:   202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)