Query= MSMg01no175_d23.b1 MSMg01no175_d23.b1 CHROMAT_FILE:
MSMg01no175_d23.b1 PHD_FILE: MSMg01no175_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:17 2005
(591 letters)
>mm_chr16_77025360_77026350
Length = 991
Score = 1069 bits (553), Expect = 0.0
Identities = 580/589 (98%)
Strand = Plus / Plus
Query: 1 accttctcctcctcggggatccccacttcctgtgtctccctcctgcttccctccctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 201 accttctcctcctcggggatccccacttcctgtgtctccctcctgctcccctggctggaa 260
Query: 61 tagtccagccctattctctcctctgctcagtcactgactgacaagtttctttattgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtccagccctattctctcctctgctcagtcactgactgacaagtttctttattgataa 320
Query: 121 gtcagggagtaattgggagcaaagcttacacaacactgagacaagagattctcagaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagggagtaattgggagcaaagcttacacaacactgagacaagagattctcagaataa 380
Query: 181 ggattgcaatgagatgtttggtttttttggggggggagggcgtggtggtcatagaaatca 240
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 381 ggattgcaatgagatgtttggttttttttgggggggagggcatggtggtcatagaaatca 440
Query: 241 gcctttggataatacaaggataatctttacacagtgcacagtaacatgcctgtacatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctttggataatacaaggataatctttacacagtgcacagtaacatgcctgtacatagt 500
Query: 301 tagccattatgtcattaataggaccaaaagttggatttgctttaaggaaccgttttgtga 360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tagccattatgtcattaataggaccaaaagttggatttgctttaaggaattgttttgtga 560
Query: 361 cattaagctgtgaggaattatgagacccttttaatttgaaagttctgctttgaaaatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattaagctgtgaggaattatgagacccttttaatttgaaagttctgctttgaaaatagt 620
Query: 421 gttggttagttttgatttcaacttgacataatctgtaatcacccggaaagagagtctcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 gttggttagttttgatttcaacttgacataatctgtaatcacccggaaagagagtttcac 680
Query: 481 tgagagttgacttgttggacatgtctttggggtggtgataatctttattcctttgagatg 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagagttgacctgttggacatgtctttggggtggtgataatctttattcctttgagatg 740
Query: 541 ggtgagaaaggtccacacattatgagtcacagaattccctgtgtttggg 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtgagaaaggtccacacattatgagtcacagaattccctgtgtttggg 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_d23.g1 MSMg01no175_d23.g1 CHROMAT_FILE:
MSMg01no175_d23.g1 PHD_FILE: MSMg01no175_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:17 2005
(342 letters)
>mm_chr16_77131733_77132477
Length = 745
Score = 582 bits (301), Expect = e-170
Identities = 333/345 (96%), Gaps = 3/345 (0%)
Strand = Plus / Minus
Query: 1 attcaaaattttagagcttactttcataacgtctgagatttatgattacttacttgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 attcaaaattttagagcttactttcataacgtctgagatttatgattacttacttgaagg 486
Query: 61 cagtagatatataggctgtccaacatagacacacatgaaaatatatgcagttcttatgga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 485 cagtagatatataggctgtccaacatagacacacatggaaatatatgcagttcttatgga 426
Query: 121 gttagcaggaggtgtagagaacgaggctcaggagagccccaagaagatcttctctggaga 180
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gttggcaggagatgtagagaacgaggctcaggagagccccaagaagatcttctctggaga 366
Query: 181 tccagggagcaggctctgctgg---actctgtcaatgaactgcaggaaacagaggacttc 237
|||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 365 tccagggagcaggcactgctgggctactctgtaaatgaactgcaggaaacagaggacttc 306
Query: 238 tgggaacattcctctgtccgttcctccttccactcaaaatctgttatcctcagagtgtta 297
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 305 tgggaacattcctccgtccgttcctccttccactcaaactctgttatcctcagagggtta 246
Query: 298 gtccaatttcttcagctcagatcatatggccaaccctttaggaga 342
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcccaatttcttcagctcagatcatatggccaaccctttaggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 745
Length adjustment: 9
Effective length of query: 333
Effective length of database: 736
Effective search space: 245088
Effective search space used: 245088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
