Query= MSMg01no175_k01.b1 MSMg01no175_k01.b1 CHROMAT_FILE:
MSMg01no175_k01.b1 PHD_FILE: MSMg01no175_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:44 2005
(677 letters)
>mm_chr16_26901886_26902960
Length = 1075
Score = 1212 bits (627), Expect = 0.0
Identities = 661/673 (98%), Gaps = 2/673 (0%)
Strand = Plus / Plus
Query: 5 gaattctacttgattgttttgagaaatcataacttcaacaacaatagtagatttaagctt 64
|||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||
Sbjct: 205 gaattctacttgattgttttgaaaaatcataactttaacaacattagtagatttaagctt 264
Query: 65 attagcatttactatgtgaaaatatcaacaaaatgattaaggaagataatagggcttgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attagcatttactatgtgaaaatatcaacaaaatgattaaggaagataatagggcttgtt 324
Query: 125 ttacttttagtatttttttttacatttagaaaagacaatagtgcaaaagaaaaaagaatc 184
|||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 325 ttacttttagta--tttttttacgtttagaaaagacaatagtgcagaagaaaaaagaatc 382
Query: 185 gctgaagccaggaaagcttgtttgtggctaaatagaataaaatccttactttaatcccct 244
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 383 gctgaagccaggaaagcttgtttgtggctaaacagagtaaaatccttactttaatcccct 442
Query: 245 aatgtcttagtaccatacaccaaatctctcagaaacagatgtctttttcatacacagtgt 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 aatgtcttagtaccatacaccaaatctctcagaaacagatgtctttttaatacacagtgt 502
Query: 305 atgaaagaatacaatctacacaagcgtgagcatattaataatctcatcagtaaaaagatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgaaagaatacaatctacacaagcgtgagcatattaataatctcatcagtaaaaagatc 562
Query: 365 attagacatgtttctcagaaccatcgtcacagccagaaattggtggtgatttttatcatc 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 attagacatgttcctcagaaccatcgtcacagccagaaattggtggtgatttttatcatc 622
Query: 425 ttcgctatttgaatttttaaaaaatttcaatttaagcagttgctatcttcttgatgccag 484
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 ttcgctatttgaatttttaaaaaatttcaatttaagcagttgctatcttcctgatgccag 682
Query: 485 ttctccagcacgcacacacttgtcaacatgtatgcagtgctgtgctgggcatgtcacatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttctccagcacgcacacacttgtcaacatgtatgcagtgctgtgctgggcatgtcacatg 742
Query: 545 agtgagctctgttgtgcatccttatagccaacctcaggaatcagtttgcataagtcgtac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agtgagctctgttgtgcatccttatagccaacctcaggaatcagtttgcataagtcgtac 802
Query: 605 tgaatataatagagtccagactcaggacttagtctaaatcattcattttctttgagaatt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgaatataatagagtccagactcaggacttagtctaaatcattcattttctttgagaatt 862
Query: 665 agtcttaagaaat 677
|||||||||||||
Sbjct: 863 agtcttaagaaat 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1075
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1065
Effective search space: 710355
Effective search space used: 710355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_k01.g1 MSMg01no175_k01.g1 CHROMAT_FILE:
MSMg01no175_k01.g1 PHD_FILE: MSMg01no175_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:44 2005
(344 letters)
>mm_chr16_26947610_26948354
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%), Gaps = 1/345 (0%)
Strand = Plus / Minus
Query: 1 aagggatgtgtgcatgtcttcatgcaatattgtaggggatgcacatgagacacaatattt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 545 aagggatgtgtgcatgtcttcatgcaatattgtaggggatgcaaatgagacacaatattt 486
Query: 61 tgaaagagagactcaagctctcttttttcttgaacaggggtacagttccccctaaaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgaaagagagactcaagctctcttttttcttgaacaggggtacagttccccctaaaatct 426
Query: 121 ctaaaggaagttgagaaaaatgtttgtccttcatggccttgctcttcactgtgatcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctaaaggaagttgagaaaaatgtttgtccttcatggccttgctcttcactgtgatcttcc 366
Query: 181 ctggatgctggtatttgttaagactaaccaaagtagaggcaacacatgtctggccactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctggatgctggtatttgttaagactaaccaaagtagaggcaacacatgtctggccactgt 306
Query: 241 tccaaaca-attccaaacataaaaattaagccttcatgaaaactccatgaaattgaataa 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tccaaacatattccaaacataaaaattaagccttcatgaaaactccatgaaattgaataa 246
Query: 300 atattaatggttcatgttatatagtcactactattgttctgacaa 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atattaatggttcatgttatatagtcactactattgttctgacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 745
Length adjustment: 9
Effective length of query: 335
Effective length of database: 736
Effective search space: 246560
Effective search space used: 246560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
