Query= MSMg01no177_a04.b1 MSMg01no177_a04.b1 CHROMAT_FILE:
MSMg01no177_a04.b1 PHD_FILE: MSMg01no177_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:28 2005
(501 letters)
>mm_chr16_17742121_17743021
Length = 901
Score = 642 bits (332), Expect = 0.0
Identities = 365/376 (97%), Gaps = 6/376 (1%)
Strand = Plus / Minus
Query: 128 caggtttcaaagtaactttttttttaaagatttatttatttattatatgtaagtacactg 187
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 901 caggtttcaaagtaacttttttttt-aagatttatttatttattatatgtaagtacactg 843
Query: 188 tagctgt-cttcagacactccagaagaggg-agtcagatctcgttacagatggttgtgag 245
||| ||| | |||||||||||||||||||| | |||||| || |||| ||||||||||||
Sbjct: 842 tagttgtac-tcagacactccagaagagggca-tcagatttcattacggatggttgtgag 785
Query: 246 ccaccatgtggttgctgggatttgaactcgggaccttc-gaagagcagtcggcgctctta 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 784 ccaccatgtggttgctgggatttgaactcgggaccttcggaagagcagtcggcgctctta 725
Query: 305 accactgagccatctcgccagccctcaaagtaacttttttgctattcctttaattaaagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 accactgagccatctcgccagccctcaaagtaacttttttgctattcctttaattaaagg 665
Query: 365 aatttgatttacaatatctgctcccagaaatcagccacctgtgtctcgtggtaaatgatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aatttgatttacaatatctgctcccagaaatcagccacctgtgtctcgtggtaaatgatt 605
Query: 425 atataaaaacaaaaggtttcaagcctaaataagttatgagggtctaataaaatgttttaa 484
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agataaaaacaaaaggtttcaagcctaaataagttatgagggtctaataaaatgttttaa 545
Query: 485 ggtatgtaggagcaag 500
||||||||||||||||
Sbjct: 544 ggtatgtaggagcaag 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_a04.g1 MSMg01no177_a04.g1 CHROMAT_FILE:
MSMg01no177_a04.g1 PHD_FILE: MSMg01no177_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:28 2005
(293 letters)
>mm_chr16_17618231_17618923
Length = 693
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 ctgcagtctagcaggtgaggagcctccacagcgccagctactggccacctctttccttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcagtctagcaggtgaggagcctccacagcgccagctactggccacctctttccttgc 260
Query: 61 caggccctgcagctcccagtctgtagcggctccaacaacccagggcaagcatcccgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggccctgcagctcccagtctgtagcggctccaacaacccagggcaagcatcccgagag 320
Query: 121 gtttttacatacttgcttgacttgttctgagtgcttaatgtgaatagggcagtatgttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttttacatacttgcttgacttgttctgagtgcttaatgtgaatagggcagtatgttag 380
Query: 181 ccatgggaatggtgtggtggaaagctgtccgctgcctgacgatcagatccctgatagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgggaatggtgtggtggaaagctgtccgctgcctgacgatcagatccctgatagacg 440
Query: 241 gatttaggtagcagcacccagaaccgtgcctggcatatgctgggtacttggta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttaggtagcagcacccagaaccgtgcctggcatatgctgggtacttggta 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
