Query= MSMg01no178_k02.b1 MSMg01no178_k02.b1 CHROMAT_FILE:
MSMg01no178_k02.b1 PHD_FILE: MSMg01no178_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:28 2005
(439 letters)
>mm_chr16_83619762_83620600
Length = 839
Score = 789 bits (408), Expect = 0.0
Identities = 426/432 (98%)
Strand = Plus / Minus
Query: 8 gaattcctctgcttcccctcaaattaactccaggaatttaaaagataaaatatattggct 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaattcctctgcttcacctcaaattaactccaggaatttaaaagataaaatatattggct 447
Query: 68 ccttcttattccctaacttcaacttgcctctgctgcatgaatagaatggacctgaactca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccttcttattccctaacttcaacttgcctctgctgcatgaatagaatggacctgaactca 387
Query: 128 actccactgcttcctgtgctgactgtctgaactgaattcaactgacttaactctcaactg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 actccactgcttcctgtgctgactgtctgaactgaattcaactgacttaactctcaactg 327
Query: 188 actgacagaaccgaatggcaatatagctcaggagatctgcatgactctgtctcttgtagg 247
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 326 actgacagaaccgaatggcaatatagctcaggagatcttcatgactctgtctcttgtagg 267
Query: 248 cagccatcaagatcaaaggtgtatatcaccatgcatgggcctaagctattctttgcttaa 307
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 266 cagccatcaagatcaaaggtgtatatcaccatgcattggcctaagctattctttgcttaa 207
Query: 308 cttgcactatactgggatggccttgaaatcagagatcaacttgcctctctctcctggaat 367
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cttgcactgtactgggatggccttgaaatcagagatcaacttgcctctctctcctggaat 147
Query: 368 taaagacgcgtctgtattccagccagatcacacagatgtagaaaggccctggatttgagg 427
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 taaagatgtgtctgtattccagccagatcacacagatgtagaaaggccctggatttgagg 87
Query: 428 ccttatgagagc 439
||||||||||||
Sbjct: 86 ccttatgagagc 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_k02.g1 MSMg01no178_k02.g1 CHROMAT_FILE:
MSMg01no178_k02.g1 PHD_FILE: MSMg01no178_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:28 2005
(157 letters)
>mm_chr16_83464712_83465267
Length = 556
Score = 273 bits (141), Expect = 4e-78
Identities = 150/153 (98%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 1 acttattgagaataaatgtttgaagtgtatttgttgcccatgaggtgaaccagtagccac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 acttattgagaataaatgtttgaagtgtatttgttgctcatgaggtgaaccagtagccac 260
Query: 61 acattgttttaagcatggaacttgtgccaggtatattatagcaaaggaaaaaggaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 acattgttttaagcatggaacttgtgccaggtatattatagcaaaggaaaa-ggaggagt 319
Query: 121 tggttttatttatttatttatttatttatttat 153
|||||| ||||||||||||||||||||||||||
Sbjct: 320 tggttt-atttatttatttatttatttatttat 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 556
Length adjustment: 8
Effective length of query: 149
Effective length of database: 548
Effective search space: 81652
Effective search space used: 81652
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
