Query= MSMg01no181_f01.b1 MSMg01no181_f01.b1 CHROMAT_FILE:
MSMg01no181_f01.b1 PHD_FILE: MSMg01no181_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:45 2005
(571 letters)
>mm_chr16_75924544_75925512
Length = 969
Score = 1027 bits (531), Expect = 0.0
Identities = 558/567 (98%), Gaps = 2/567 (0%)
Strand = Plus / Plus
Query: 5 gaattctggattatagctattatttttgttagttttattttctatacatatcataaatta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggattatagttattatttttgttagttttattttctatacatatcataaatta 264
Query: 65 taatagttaggagttttatttcaggtgcatgtgttctttctaatttggataggcgacatt 124
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 265 taatagttaggagttttatttcaggtgcatgtgttctttttaatttggatag-cgacatt 323
Query: 125 ctaattacaacatgcctaagattatatactctttaatgatctctaatctgaatagttaaa 184
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaat-acaacatgcctaagattatatactctttaatgatctctaatctgaatagttaaa 382
Query: 185 taggcctgtttgaagtgcagagaagccttgattgttttcaccatatccgtgatataaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taggcctgtttgaagtgcagagaagccttgattgttttcaccatatccgtgatataaaac 442
Query: 245 acatctatgtactgtttataagtgacaaagtcttatgagagtgaccgaattcactcaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acatctatgtactgtttataagtgacaaagtcttatgagagtgaccgaattcactcaaga 502
Query: 305 gcagtcactgcaagcattttattcactttctgaaatgtcattctaacttcctaacaaata 364
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 503 gcagtcactgcaagcattttattcactttctgaaatgtcactctaacttcctaacaaata 562
Query: 365 gcatgttgcatctatgcatacaagtaaaaaatttaattaatatacactatgttttcaaag 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcatgttgcatctatgtatacaagtaaaaaatttaattaatatacactatgttttcaaag 622
Query: 425 tatcattcatttcactcgctggaattatatatcggtagtagtgataaaaaattgacatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tatcattcatttcactcgctggaattatatatcggtagtagtgataaaaaattgacatat 682
Query: 485 tcagaaatataatagaaatctctaattgaatagcattcaaataaaagtttaacaagactt 544
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 683 tcagaaatataatagaaatctctaattgaataacattcaaataaaagtttaacaagactt 742
Query: 545 ctattcattttaaccatgaaacgtgtg 571
| |||||||||||||||||||||||||
Sbjct: 743 caattcattttaaccatgaaacgtgtg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 969
Length adjustment: 10
Effective length of query: 561
Effective length of database: 959
Effective search space: 537999
Effective search space used: 537999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_f01.g1 MSMg01no181_f01.g1 CHROMAT_FILE:
MSMg01no181_f01.g1 PHD_FILE: MSMg01no181_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:45 2005
(661 letters)
>mm_chr16_76088068_76089128
Length = 1061
Score = 1239 bits (641), Expect = 0.0
Identities = 656/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Minus
Query: 1 cttatgttttattatgttcatatctactctctctaacttacctcagatctcacctccttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 786 cttatgttttattatgttcatatctactctctctaacttacctcagatct-acctccttc 728
Query: 61 cacacttacccaactttgtgttctcattttgaaaaaaaacccagtgagccaaatttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cacacttacccaactttgtgttctcattttgaaaaaaaacccagtgagccaaatttatgt 668
Query: 121 tgcctatattcttagatgtatagctagcacaggaacacgattggatgaccagagaccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgcctatattcttagatgtatagctagcacaggaacacgattggatgaccagagaccaca 608
Query: 181 cccttagagtgaacaaactattcttaacctatcagctctcacacttcctgcatccttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cccttagagtgaacaaactattcttaacctatcagctctcacacttcctgcatccttctc 548
Query: 241 accctgttctgggatttttccggtttgagatttttgacttttgcctccaaatgacttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 accctgttctgggatttttccggtttgagatttttgacttttgcctccaaatgacttatt 488
Query: 301 gtgatgcacagaaactgttgcattttctaaacttcaggagaaaagctgtcttgttttttg 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtgatgcacagaaattgttgcattttctaaacttcaggagaaaagctgtcttgttttttg 428
Query: 361 aggggtttgttttcctataagatggcaattaaaacagagacccacaactattcaatttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 427 aggggtttgttttcctataagatggcaattaaaacagagacccacaactattcaacttgc 368
Query: 421 aaaagaataagagtctatggattggtcatctgaaatgggacatttatttagtcacacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaagaataagagtctatggattggtcatctgaaatgggacatttatttagtcacacttt 308
Query: 481 ttcttttcctatggctcaggaagtatcaaggaagagggagcagaaagactgtaagagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttcttttcctatggctcaggaagtatcaaggaagagggagcagaaagactgtaagagcca 248
Query: 541 gaggtagtaggtgactaaattaaacactataggtgactacattaaacactattttacaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaggtagtaggtgactaaattaaacactataggtgactacattaaacactattttacaaa 188
Query: 601 cataacagggcaggtacacataggaactcatgacagttgtgacagcatgcattggctcct 660
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cacgacagggcaggtacacataggaactcatgacagttgtgacagcatgcattggctcct 128
Query: 661 g 661
|
Sbjct: 127 g 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
