Query= MSMg01no183_m18.b1 MSMg01no183_m18.b1 CHROMAT_FILE:
MSMg01no183_m18.b1 PHD_FILE: MSMg01no183_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:55 2005
(474 letters)
>mm_chr16_84187219_84188091
Length = 873
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%), Gaps = 1/468 (0%)
Strand = Plus / Plus
Query: 5 gaattcctggggctaaccaatgtctcttaagcataagacgggaagtgcactcataagatc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggggctaaacaatgtctcttaagcataagacgggaagtgcactcataagatc 264
Query: 65 tctacaatatggttgccagaataagactagcataatggtaataccagttgacatggcaac 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctacaatatggttgtcagaataagactagcataatggtaataccagttgacatggcaac 324
Query: 125 atagacagggggaaatccatatgatcctaaacctagaggaatacatatgtctattgtcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atagacagggggaaatccatatgatcctaaacctagaggaatacatatgtctattgtcta 384
Query: 185 ttgagagaagagttagttccctccagtgataggcctagaaaataatttttaaaatcatac 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 ttgagagaagagttagttccctccagtgataggcctagaaaatattttttaaaatcatac 444
Query: 245 tattaagtaacatgtggtggacttggtgaccaaacattatgataatggagaaggtatgag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tattaagtaacatgtggtggacttggtgaccaaacattatgataatggagaaggtatgag 504
Query: 305 tggatcatgaacaaattctccctttagacttgaataggtagaataacttactacatacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggatcatgaacaaattctccctttagacttgaataggtagaataacttactacatacac 564
Query: 365 tgaaagatgtcaatgggatgagtaatatcaagagaacttcctgaagtatagtgcaatagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaaagatgtcaatgggatgagtaatatcaagagaacttcctgaagtatagtgcaatagt 624
Query: 425 ctattattttcccagtttaagtgatgtagtgttatngggttgggtgtg 472
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 625 ctattattttcccagtttaagtgatgtagtgttat-gggttgggtgtg 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 873
Length adjustment: 10
Effective length of query: 464
Effective length of database: 863
Effective search space: 400432
Effective search space used: 400432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_m18.g1 MSMg01no183_m18.g1 CHROMAT_FILE:
MSMg01no183_m18.g1 PHD_FILE: MSMg01no183_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:55 2005
(293 letters)
>mm_chr16_84262228_84262920
Length = 693
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 tcagtcaccttgatataattctttcaactttcattcacttttctttaaagtttataattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcagtcaccttgatataattctttcaactttcattcacttttctttaaagtttataattt 577
Query: 61 tatttttcttaggtgagattccattgtgtgtgtacaccacatagtcactatcagttcttc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tattttccttaggtgagattccattgtgtgtgtacaccacatagtcactatcagttcttc 517
Query: 121 tgttaatgaacatctaggctgtgtcatagtgaatactctaccaatactcacgtgtaagta 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 516 tgttaatgaacatctaggctgtgtcatagtgaatactctaccaatactcatgtgtaagta 457
Query: 181 ttaacttgataatgtgtagagccctttgagtgtgtgtctggagtagtatgcctgggttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttaacttgataatgtgtagagccctttgagtgtgtgtctggagtagtatgcctgggttat 397
Query: 241 gtgctagttctacttctatttttactgtgagactttcatattgattttctt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtgctagttctacttctatttttactgtgagactttcatattgattttctt 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
