Query= MSMg01no186_m17.b1 MSMg01no186_m17.b1 CHROMAT_FILE:
MSMg01no186_m17.b1 PHD_FILE: MSMg01no186_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:54 2005
(325 letters)
>mm_chr16_74434803_74435526
Length = 724
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgtaaactcatatttaaaaattgctgtgttttgctcaataatatctttgtccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattcttgtaaactcatatttaaaaattgctgtgttttgctcaataatatctttgtccc 462
Query: 65 tgcctatcaagagctcaactcatgaaaattgtctttgaaagtattcatttaagaaaaaaa 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 461 tgcctatcaagagctcaacttatgaaaattgtctttgaaagtattcatttaag-aaaaaa 403
Query: 125 gaaaggaaatatatcattgctagccaatgttccaggagaaaccatgccatttcccttcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gaaaggaaatatatcattgctagccaatgttccaggagaaaccatgccatttcccttcca 343
Query: 185 tccagcccatcataaaagctccgaggaaataatgtttaaattcaattaaccaagatggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tccagcccatcataaaagctccgaggaaataatgtttaaattcaattaaccaagatggcc 283
Query: 245 agaatcaatttaacaagcattggctaatgttttactaaagcaaactctcttttcttgaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agaatcaatttaacaagcattggctaatgttttactaaagcaaactctcttttcttgaaa 223
Query: 305 catgattaatatcattta 322
||| ||||||||||||||
Sbjct: 222 cattattaatatcattta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_m17.g1 MSMg01no186_m17.g1 CHROMAT_FILE:
MSMg01no186_m17.g1 PHD_FILE: MSMg01no186_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:54 2005
(286 letters)
>mm_chr16_74273292_74273977
Length = 686
Score = 491 bits (254), Expect = e-143
Identities = 275/282 (97%)
Strand = Plus / Plus
Query: 4 cagccttaaagagatagcgttctttccagattaatttaatgatgccccgtgtgtgtagaa 63
|||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||
Sbjct: 204 cagccttaaagagatagcgttctttccagattaatttaatgaggcctggtgggtggagaa 263
Query: 64 aagggaccaagaagacagctcagttggcagatttaggttctatattttcagcacttctat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagggaccaagaagacagctcagttggcagatttaggttctatattttcagcacttctat 323
Query: 124 aacaagtgtgtttcatttgtaatacgtttctgcaaagcaagcataggcagttagttcaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacaagtgtgtttcatttgtaatacgtttctgcaaagcaagcataggcagttagttcaag 383
Query: 184 ttctgtcttgaagcttaaaattgtgtatattctgttctaaaaaaagtttttgtaggaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctgtcttgaagcttaaaattgtgtatattctgttctaaaaaaagtttttgtaggaaat 443
Query: 244 gagttatctgttgtatgaatatagatatttcccatttaaaag 285
|||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 444 gagttagctgttgtatgaatatagatatttcccatttcaaag 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
