Query= MSMg01no186_o14.b1 MSMg01no186_o14.b1 CHROMAT_FILE:
MSMg01no186_o14.b1 PHD_FILE: MSMg01no186_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:03 2005
(319 letters)
>mm_chr16_82784289_82785007
Length = 719
Score = 487 bits (252), Expect = e-142
Identities = 304/328 (92%), Gaps = 15/328 (4%)
Strand = Plus / Minus
Query: 5 gaattctgcaggagaggtggtagaagtgaggtaagatgtagcatagatagaggaagaaaa 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 662 gaattctgcaggagaggtggtagaagcgaggtaagatgtagcatagatagaggaagaaaa 603
Query: 65 caaacaa--aaaaaaatgacaacaaagaaaaccacctttaaaaaaacaaaacaaaacaaa 122
||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 602 caaacaaacaaaaaaatgacaa-aaaaaaaaccacctttaaaaaaacaaaacaaaacaaa 544
Query: 123 acaaccctaaaatg----------aaaacaaaaacaaaaaacccaagcaaagaaaaagca 172
|||||||||||||| |||||||||||||||||||||| |||| ||||||||
Sbjct: 543 acaaccctaaaatgaaaaaaaaaaaaaacaaaaacaaaaaacccaaacaaataaaaagca 484
Query: 173 aaattttctatcaacaaccag-aaaacagaacacataaacacacagaatctatggtaacc 231
|||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 483 aaattttctaacaacaaccagtaaaa-tgaacacataaacacacagaacctatggtaacc 425
Query: 232 tgtttaaggccagctgaggccagacgatttgtttcagggctatagtctttaacagaaaat 291
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 424 tgtataaggccagctgaggccagacgatttgtttcagtgctatagtctttaacagaaaat 365
Query: 292 cacgatagatgactttataaagctatga 319
||||||||||||||||||||||||||||
Sbjct: 364 cacgatagatgactttataaagctatga 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_o14.g1 MSMg01no186_o14.g1 CHROMAT_FILE:
MSMg01no186_o14.g1 PHD_FILE: MSMg01no186_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:03 2005
(292 letters)
>mm_chr16_82648590_82649281
Length = 692
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Plus
Query: 1 attctaaaattgagaagcgtctattatttgataaataatcacaggactgggtatagatac 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attctaaaattgagaagcgtctattatttgataaataatcacaggactatgtatagatac 260
Query: 61 agatatataataaaataaatatgtcaagaagacacctccattcatatatttattctaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatatataataaaataaatatgtcaagaagacacctccattcatatatttattctaata 320
Query: 121 ttattaaagtataatttgctatatagacacaaattgtattatttaactttaaaaataatt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattaaagtataatttgttatatagacacaaattgtattatttaactttaaaaataatt 380
Query: 181 gaatatttttattttcaatagcatacatagaagaggttgttgtgttgagagaaatgagct 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gaatatttttattttcaatagcatacatagaagaggatgttgtgttgagagaaatgagct 440
Query: 241 agattcagaaagataaataaaatttgcctcatgtggaaaatcaaatgttg 290
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 agattcagaaagataaataaaatttgcctcatgtggaaaatgaaatgttg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
