NNAATCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCATGAGTTATAAAGACACACAGAAACACATTCAAAGG
CATGAGCATGCAAGAGCACATACACATACAAACACATACACACGCATACA
CACACACATACACACACACACATACACACATACATACACACACACATACA
CACACACACATACACACACACATACACACACATACACACACATATACACA
CATACACACACACATATACACACATACACACATACACACATACACACACA
TACACACACACATACACACACACATACACACACACACACATACACACACA
CACAGTTACAACATTTCTAAACAATATTTATTTTCCGCCACCCCCCCTAC
ATTCAAAGCTTCAAAGCAAGCTCACATAGGATAATCTATAACATAATAAC
AAAGACGGCAGGGTGACAGTTTCCGTCACCATCACTGTGAGCTTTTATTA
CTCAAATTCCATTCATTCCTTTAAGGTTTTAATTTTTATCAAAATTGAAG
TTGTCCTGGCTGGGTTCCCCTCTGACACACTTTCAAAAACAAATTTGTTC
CCTTCCAATTTTGATATCTATCTACCTATAGCCACACAGTTATCCATAGT
TCAGTGCGTGCACACTCAACTAAAAGATTCTTACACAGACTTTACTAGTC
GGAACATTAGACTATGGAACTGGCATTTAGACGTAGCTGTACTCACATCA
CAGTCTN

CCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTTGTTGCTGGGGTGTGCTTG
AGCTTACAACACAAGGCAAATCCCCCCCTTAGTCTGTACCCTGTTAAAGA
TGCACGTAACTAGATCTAGATCGATCTGATCAAGTTCTCAATCCCTTAAA
ACTAATGATGGTTTCTTGGCTGGCCCCTTCCCTACTCTGGTGCCCAGGCT
CTCTTACTGAGCAAGAACTAGGGAAGTGACTTTATGTTTTATTTTTTAAC
CTAGCTCTAAGTTTGTACACAGATAGGACTAAAGATGCCATGGACATGAA
GCAATCCTATGTTTATTTAGAAAATGCTCAAAGATAGTATGAGAATGATG
GTGGTGTTTTTCTGATTTGTGTATATGGTGGACAAGTTTTACAACAGGCT
ACTGCCCTGGAATTAACTTTTCATAATCACAAGAGAAGAGCCATCGTTCT
CAGTGCTATGTCTGTGTTGAAGAGTTACCAAGGAGTAATAAGATTTTGAA
GTTCTCTGTGACTCACTAGTTCACATTTTACAGGTAAGGAAATTGAAATT
CAGCGGGCCACTTAGTCATATTTCTTGTTCTTCCATAATTGCATCTGTTT
GACCTATCTTGTACTTACGGTATTTAGATGAGGCTGTCTCCCATGATGCT
GAGATCTGAAGGGTGACGACATTCTCTTTCTCCTT

Query= MSMg01no188_h19.g1 MSMg01no188_h19.g1 CHROMAT_FILE:
MSMg01no188_h19.g1 PHD_FILE: MSMg01no188_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:09 2005
         (638 letters)



>mm_chr16_24455902_24456939
          Length = 1038

 Score = 1172 bits (606), Expect = 0.0
 Identities = 630/638 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttttgttgctggggtgtgcttgagcttacaacacaaggcaaatcccccccttagtctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 201 ctttttgttgctggggtgtgcttgagcttacaacacaaggcaaatccctgtcttagtctg 260

                                                                       
Query: 61  taccctgttaaagatgcacgtaactagatctagatcgatctgatcaagttctcaatccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taccctgttaaagatgcacgtaactagatctagatcgatctgatcaagttctcaatccct 320

                                                                       
Query: 121 taaaactaatgatggtttcttggctggccccttccctactctggtgcccaggctctctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaactaatgatggtttcttggctggccccttccctactctggtgcccaggctctctta 380

                                                                       
Query: 181 ctgagcaagaactagggaagtgactttatgttttattttttaacctagctctaagtttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagcaagaactagggaagtgactttatgttttattttttaacctagctctaagtttgt 440

                                                                       
Query: 241 acacagataggactaaagatgccatggacatgaagcaatcctatgtttatttagaaaatg 300
           |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 acacagataggactaaagataccatggacatgaagcaatcctatgtttagttagaaaatg 500

                                                                       
Query: 301 ctcaaagatagtatgagaatgatggtggtgtttttctgatttgtgtatatggtggacaag 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ctcaaagatagtatgagaatgatggtggtctttttctgatttgtgtatatggtggacaag 560

                                                                       
Query: 361 ttttacaacaggctactgccctggaattaacttttcataatcacaagagaagagccatcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttacaacaggctactgccctggaattaacttttcataatcacaagagaagagccatcg 620

                                                                       
Query: 421 ttctcagtgctatgtctgtgttgaagagttaccaaggagtaataagattttgaagttctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctcagtgctatgtctgtgttgaagagttaccaaggagtaataagattttgaagttctc 680

                                                                       
Query: 481 tgtgactcactagttcacattttacaggtaaggaaattgaaattcagcgggccacttagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 tgtgactcactagttcacattttacaggtaaggaaattgaaattcagcgggtcacttagt 740

                                                                       
Query: 541 catatttcttgttcttccataattgcatctgtttgacctatcttgtacttacggtattta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catatttcttgttcttccataattgcatctgtttgacctatcttgtacttacggtattta 800

                                                 
Query: 601 gatgaggctgtctcccatgatgctgagatctgaagggt 638
           |||||||| |||||||||||||||||||||||||||||
Sbjct: 801 gatgaggccgtctcccatgatgctgagatctgaagggt 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)