Query= MSMg01no190_g10.b1 MSMg01no190_g10.b1 CHROMAT_FILE:
MSMg01no190_g10.b1 PHD_FILE: MSMg01no190_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:38 2005
(309 letters)
>mm_chr16_75562657_75563368
Length = 712
Score = 561 bits (290), Expect = e-164
Identities = 303/308 (98%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 5 gaattcactatgtaactgaagcctggccccaaactcagaataatcctgtctattttgccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactatgtaactgaagcctggccccaaactcagaataatcctgtctattttgccc 264
Query: 65 tgtaaattctaaggttacatatatgagttacaataaatggatgc-tttaaa--aaaatag 121
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 265 tgtaaattctaaggttacatatatgagttacaataaatggatgcttttaaaagaaaatag 324
Query: 122 cagttttctggtacctctttttcaaattgtttctcataaaaattatgtgttagtaatttt 181
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagttttctggtacctttttttcaaattgtttctcataaaaattatgtgttagtaatttt 384
Query: 182 gcacatttatgattcacctgttttctatgggcaaaatccttacactttgcagtagcaggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcacatttatgattcacctgttttctatgggcaaaatccttacactttgcagtagcaggg 444
Query: 242 acaggaaaatcgttggcatggaaatgatgtatgatagagaaaacaatacaagagaaactg 301
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 acaggaaaatcgttggcatggaaatgatgtatgatagagaaaagaatacaagagaaactg 504
Query: 302 aaagaact 309
||||||||
Sbjct: 505 aaagaact 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 712
Length adjustment: 9
Effective length of query: 300
Effective length of database: 703
Effective search space: 210900
Effective search space used: 210900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_g10.g1 MSMg01no190_g10.g1 CHROMAT_FILE:
MSMg01no190_g10.g1 PHD_FILE: MSMg01no190_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:38 2005
(279 letters)
>mm_chr16_75755946_75756624
Length = 679
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Minus
Query: 1 tcacgttagccatttaggattataaacagcaaacttgaatttctcagatgtatgacaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcacgttagccatttaggattataaacagcaaacttgaatttctcagatgtatgacaact 420
Query: 61 caagacatgaacaaaatcaatttgcagaatggagcagataaataatactaaaatgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caagacatgaacaaaatcaatttgcagaatggagcagataaataatactaaaatgggaag 360
Query: 121 ataaatgtttttttttgaaaaaacaggatggtggtgttggaggtggggctatgtagttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ataaatgtttttttttgaaaaaacaggatggtggtgttggaggtggggctatgtagttag 300
Query: 181 catcctcttccttagtagttacaatgttaaaaccatgaaggaaattgtcttcaatcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 catcctcttccttagtagttacaatgttaaaaccatgaaggaaattgtcttcaatcaatt 240
Query: 241 gttagagtcatgtgtacctaatcctgacaccagtatagt 279
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 239 gttagagtcatgtgtacctaatcctgacaccagtgtagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
