Query= MSMg01no191_l08.b1 MSMg01no191_l08.b1 CHROMAT_FILE:
MSMg01no191_l08.b1 PHD_FILE: MSMg01no191_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:25 2005
(315 letters)
>mm_chr16_92059287_92060001
Length = 715
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%), Gaps = 2/310 (0%)
Strand = Plus / Plus
Query: 5 gaattcggtaatgtagtgtgctttcacgcactctccttccctagcaggtacagtttaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcggtaatgtagtgtgctttcacgcactctccttccctagcaggtacagtttaaaa 264
Query: 65 gaaaacaaaagcaaccgttgtgcctttttt-gagcgtttggaagcagctttcttctagcc 123
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 265 gaaaacaaaagcaaccgttgt-cctttttttgagcgtttggaagcagctttcttctagcc 323
Query: 124 ctgggcatgtaggctttgggtcaatttcaagtagtggcttcagtttgaatcaacttaagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgggcatgtaggctttgggtcaatttcaagtagtggcttcagtttgaatcaacttaagc 383
Query: 184 caggggtcacgggctaggctctggtgaacagctaacagtcaggcagcaggaggagattgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caggggtcacgggctaggctctggtgaacagctaacagtcaggcagcaggaggagattgt 443
Query: 244 tcggtgtgccttgtacagggttggcttggaaaggacaccagagccacctgatggtcctga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcggtgtgccttgtacagggttggcttggaaaggacaccagagccacctgatggtcctga 503
Query: 304 agtttgtgcc 313
||||||||||
Sbjct: 504 agtttgtgcc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_l08.g1 MSMg01no191_l08.g1 CHROMAT_FILE:
MSMg01no191_l08.g1 PHD_FILE: MSMg01no191_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:26 2005
(280 letters)
>mm_chr16_92163914_92164593
Length = 680
Score = 480 bits (248), Expect = e-140
Identities = 275/290 (94%), Gaps = 10/290 (3%)
Strand = Plus / Minus
Query: 1 caattcccaaaatgaaaacacaattactcagaggccatgaggcaggggacgagggctccc 60
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 564 caattcccaaaatgaaaacacaattactcagaggtcataaggcaggggacgagggctccc 505
Query: 61 ctttcacgtgccct----------agaggaaccccgggacccaccagtctgggtggaatt 110
||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctttcacatgccctagagggtataagaggaaccccgggacccaccagtctgggtggaatt 445
Query: 111 tcaagttgacttctaacttctctactcctgagcaccctccctgtctggcagagttgaaag 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaagttgacttctaacttctctactcctgagcaccctccctgtctggcagagttgaaag 385
Query: 171 ggtttaggatcacgtgaccaaggaaggccagagacctgcaaaggaagccgtagccctacc 230
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtttaagatcacatgaccaaggaaggccagagacctgcaaaggaagccgtagccctacc 325
Query: 231 ttctagattggcctgtgacagaagtgaggctgaagcctggatgccagagt 280
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctagattggcctgtgacagaagtgaggctgaagcctggatgccagagt 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
