Query= MSMg01no191_p08.b1 MSMg01no191_p08.b1 CHROMAT_FILE:
MSMg01no191_p08.b1 PHD_FILE: MSMg01no191_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:45 2005
(622 letters)
>mm_chr16_51674568_51675587
Length = 1020
Score = 1085 bits (561), Expect = 0.0
Identities = 604/619 (97%), Gaps = 2/619 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcttcatctgcatgtccaggtcatagcactgactataaacttcatgcagaca 63
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 204 ggaattcatcttcatctgcatgtccaggtcatagcactgaccatgaacttcatgcagaca 263
Query: 64 ggagctgattgattcagtgtcctgtgcagtgacaggacatcacaggacctacatcgcaag 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagctgattgattcagtgtcctgtccagtgacaggacatcacaggacctacatcgcaag 323
Query: 124 tgtcagttcttcttttgttttgtttttttaaaaaataatcttgatggaagcactttttga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtcagttcttcttttgttttgtttttttaaaaaataatcttgatggaagcactttttga 383
Query: 184 aaatcaaatcagtcggattgtatgtattttaaaaatggtaaacctctctatgaaaaattg 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatcaaatcagtcgggttgtatgtattttaaaaatggtaaacctctctatgaaaaattg 443
Query: 244 tgtatttatgcaaatgtgctaggagaatcctcgtagtggagcaactctgagtctagaaac 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtatttatgcaaatgtgctatgagaatcctcgtagtggagcaactctgagtctagaaac 503
Query: 304 aaggatcatatatgatatttgccttcctctgaaagtctgatctctaagactacatttaca 363
|||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 504 aaggatcatagatgatatttggtttcctctgaacgtctgatctctaagactacatttaca 563
Query: 364 actccctctgtgacttaaggatgacatccaccagtgccaatttcaatatgccccatcttt 423
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 actccctctgtgacttaaggatgacatccaccagtgccaatttcaatattccccatcttt 623
Query: 424 gtagcaaagcatttgattgtggcatacaatatgataggttaatgattcctagaccttcct 483
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 624 gtagcaaagcatttgattgtggcatacaatatggtaggttaatgattcctagaccttcct 683
Query: 484 gcatagaaaagagtaatgctttaagaaacaaaaatagaaacaaagcagaaaactgatgtg 543
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 684 gcatagaaaagagtaatgctttaagaaa--aaaatagaaacaaagcagaaaactgatgtg 741
Query: 544 atcgatgacacaactacccccaatcactcagtttccttccagttaaccaaagtggaaact 603
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 742 atcgataacacaactacccccaatcacccagtttccttccagttaaccaaagtggaaact 801
Query: 604 atgaaatacaacctcagaa 622
|||||||||||||||||||
Sbjct: 802 atgaaatacaacctcagaa 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1020
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1010
Effective search space: 618120
Effective search space used: 618120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_p08.g1 MSMg01no191_p08.g1 CHROMAT_FILE:
MSMg01no191_p08.g1 PHD_FILE: MSMg01no191_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:45 2005
(285 letters)
>mm_chr16_51819532_51820216
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 aattgaatgcaagcttgcattgacagtgctttgcacccactacgtacgttactaaaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aattgaatgcaagcttgcattgacagtgctttgcacccactacgtacgttactaaaatcc 426
Query: 61 ttttttcttcctatagaaatcttgtgctgttccaatccctttattctctgcattgttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttttttcttcctatagaaatcttgtgctgttccaatccctttattctctgcattgttgca 366
Query: 121 ccacaaacacctagtttaaactgacacacaatgccatttttgaaagcctctgaagggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccacaaacacctagtttaaactgacacacaatgccatttttgaaagcctctgaagggcta 306
Query: 181 ttcatttgagtacatgttgtagcaaagggaacaacctggcaccccctatacaagcatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttcatttgagtacatgttgtagcaaagggaacaacctggcaccccctatacaagcatttt 246
Query: 241 gcactaggtaaacaatgacatttatagttttttcaaaactgatat 285
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 245 gcactaggtaaacaatgacatttatagtcctttcaaaactgatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
