Query= MSMg01no194_c15.b1 MSMg01no194_c15.b1 CHROMAT_FILE:
MSMg01no194_c15.b1 PHD_FILE: MSMg01no194_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:58 2005
(629 letters)
>mm_chr16_50666072_50667100
Length = 1029
Score = 1125 bits (582), Expect = 0.0
Identities = 617/630 (97%), Gaps = 5/630 (0%)
Strand = Plus / Plus
Query: 1 agtcttttattctctctagcttcagtaatttcaggtggcactgggtatgaggtgttacca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agtcttttattctctctagcttcagtaatttcaggtggcactgggtgtgaggtgttacca 260
Query: 61 gtggcagtttgctggcagcatctggtcccttcgttttcttcttctttctccccactctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggcagtttgctggcagcatctggtcccttcgttttcttcttctttctccccactctag 320
Query: 121 ttgggacaggaggttcgtatttctttttcttgcccaggatcatggccaccactctgactc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgggacaggaggttcgtatttctttttcttgcccaggatcatggccaccactctgactt 380
Query: 181 tgacccatcttccttcagtcgtccaagtcgccaccgccggaagtgcatccaccaaagccg 240
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct: 381 tgacccatcttccttcagtcgtccaagtcgccaccgctggaagtgtatccaccaaaggcg 440
Query: 241 attgtgtgtttctttatacttaaagtagtttatgtatttttttattctttctttttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtgtgtttctttatacttaaagtagtttatgtatttttttattctttctttttattt 500
Query: 301 cataataaggaggcaatgaagaaagcaatatctaaaatgatgaatattttaattaaatat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 cataataaggaggcaatgaagaaagcaatatctaaaatgatgaatattttaattaagtat 560
Query: 361 tttatttatttacattccagccattttctccctcctgccccccccccacagttcctcacc 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 tttatttatttacattccagccattttctccctcctgccccccccc---agttcctcacc 617
Query: 421 ccatttcccctcccccttgctcccaagagggtgctccccctcaagtatcccc-ttccttg 479
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 618 ccatttcccctcccccttgctcccaagagggtgctcccc-tcaagtatcccccttccttg 676
Query: 480 gggcctcaagtctctgaaggtttagaattaggcgtatcttctcctactgtggccagacaa 539
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gggcctcacgtctctgaaggtttagaattaggcgtatcttctcctactgtggccagacaa 736
Query: 540 ggcagttctctgctatacatgtgcaggtgtggtagggtggtagttcagattctggggttc 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 737 ggcagttctctgctatacatgtgcaggtgtggtagggtggtagttcagtttctggggttc 796
Query: 600 ctagagggatctctgggatcttagttgaga 629
||||||||||||||||||||||||||||||
Sbjct: 797 ctagagggatctctgggatcttagttgaga 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_c15.g1 MSMg01no194_c15.g1 CHROMAT_FILE:
MSMg01no194_c15.g1 PHD_FILE: MSMg01no194_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:58 2005
(664 letters)
>mm_chr16_50769156_50770219
Length = 1064
Score = 1268 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 1 tccctctttaaacaatggaatattagaagcttttaatatttcatacacaagtgtgtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tccctctttaaacaatggaatattagaagcttttaatatttcatacacaagtgtgtgcat 805
Query: 61 taccaaatcctagagctaataaagatggctctaatgcttccaactaatattttcaatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taccaaatcctagagctaataaagatggctctaatgcttccaactaatattttcaatact 745
Query: 121 ctgtaaaataatcaatttgttcaattttaaacagcatagttccataaatgaggtatttgg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgtaaaataatcaatttgtccaattttaaacagcatagttccataaatgaggtatttgg 685
Query: 181 catggaacctgatttaaaatgcattcctttttcgagtgattgaaccattgtaatgagaat 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 684 catggaacctgatttaaaatgcattcttttttcgagtgattgaaccattgtaatgagaat 625
Query: 241 ttataatttgtagtgtattacagaaggaaatgaattgaacttctctatcaaaattattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttataatttgtagtgtattacagaaggaaatgaattgaacttctctatcaaaattattca 565
Query: 301 tggatcaaaatctttctttgctcgaacacacagaaactggcagacaaatgcaattacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggatcaaaatctttctttgctcgaacacacagaaactggcagacaaatgcaattacatt 505
Query: 361 agataggctgccatccagaacaactgaagaatgctatttatccgatcttggcaatttaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agataggctgccatccagaacaactgaagaatgctatttatccgatcttggcaatttaag 445
Query: 421 cttaccctgctaccgtagccaagtacagacaccaggccatgaccatcacattagtaccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttaccctgctaccgtagccaagtacagacaccaggccatgaccatcacattagtaccac 385
Query: 481 gaggctatcccaaatgtcattgctggaaatcaatagagttttattgggtccaggctatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaggctatcccaaatgtcattgctggaaatcaatagagttttattgggtccaggctatta 325
Query: 541 catttgaacacaattgtcaaaatcaatccgtgtctaacttaatttgtaatttgatttgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catttgaacacaattgtcaaaatcaatccgtgtctaacttaatttgtaatttgatttgta 265
Query: 601 cctacaatgcttttgtagattagacaactgaataagaagcaccaatttattcttggagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctacaatgcttttgtagattagacaactgaataagaagcaccaatttattcttggagga 205
Query: 661 aaaa 664
||||
Sbjct: 204 aaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
