Query= MSMg01no194_g17.b1 MSMg01no194_g17.b1 CHROMAT_FILE:
MSMg01no194_g17.b1 PHD_FILE: MSMg01no194_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:17 2005
(601 letters)
>mm_chr16_93768587_93769586
Length = 1000
Score = 998 bits (516), Expect = 0.0
Identities = 583/622 (93%), Gaps = 27/622 (4%)
Strand = Plus / Minus
Query: 6 ggaattccctctttttcaatgtattccacagaaacatcagggggtttcaaagctgtgagg 65
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 720 ggaattccctctttggaaatgtattccacagaaacatcagcaggtttcaaagctgtgagg 661
Query: 66 atggtgcacgcgctacaacagtatgtagagaaaatggagagtgtgcccaccccagagcca 125
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atggggcacgcgctagaacagtatgtagagaaaatggagagtgtgcccaccccagagcca 601
Query: 126 cagaaagcgtgcaggaatggtgaggggca--------------------------tgtaa 159
||||||| | ||||||||||||||||||| |||||
Sbjct: 600 cagaaagggcgcaggaatggtgaggggcatgcctgcacctgacacgccgctgggctgtaa 541
Query: 160 agctcgtgccaatgcccatgactatgaggtctgtacagggacgtgagagggagcatccag 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agctcgtgccaatgcccatgactatgaggtctgtacagggacgtgagagggagcatccag 481
Query: 220 ctacacaaggagcccactggagaaagtgcccagctcacacagcatctgccacccaccagc 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctacacaaggagcccactggagaaagtgcccagctcacacagcatctgccacccaccagc 421
Query: 280 agtgcccagctcatccgctgacactgtcgggatctccgtgtaatacctttacttctgaat 339
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 420 attgcccagctcatccgctgacactgtcgggatctctgtgtaatacctttacttctgaat 361
Query: 340 tttttggaggattttttttcttttcttttctttcttcctttttttctgcgcatgtatgtg 399
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttttggagga-tttttttcttttcttttctttcttcctttttttctgcgcatgtatgtg 302
Query: 400 tgcattcatggtgtttctgtatgtgtttatgcactgtatgctcaaatgtgtgtgggtaca 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcattcatggtgtttctgtatgtgtttatgcactgtatgctcaaatgtgtgtgggtaca 242
Query: 460 tgtgtgtgcatgtgaggaggcctgaggctggcgtctcagctcagcactctcagatatggc 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgtgtgcatgtgaggaggcctgaggctggcgtctcagctcagcactctcagatatggc 182
Query: 520 tagtctccctaggcagcttgctccagggactgtcttctcagtgctgtcacccagttggca 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagtctccctaggcagcttgctccagggactgtcttctcagtgctgtcacccagttggca 122
Query: 580 ttcccgtgtcagcttgattcac 601
|||||||| |||||||||||||
Sbjct: 121 ttcccgtgccagcttgattcac 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_g17.g1 MSMg01no194_g17.g1 CHROMAT_FILE:
MSMg01no194_g17.g1 PHD_FILE: MSMg01no194_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:17 2005
(604 letters)
>mm_chr16_93678397_93679400
Length = 1004
Score = 1129 bits (584), Expect = 0.0
Identities = 599/604 (99%)
Strand = Plus / Plus
Query: 1 aattccaagcaactacatggtggctcacaaccatctgtaatgggatctgatgccctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccaagcaactacatggtggctcacaaccatctgtaatgggatctgatgccctctgc 260
Query: 61 tggcatgcaggtgtacatgcagatagagcactcatatacatacagcaggtctctaggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcatgcaggtgtacatgcagatagagcactcatatacatacagcaggtctctaggtaa 320
Query: 121 ggtggaatgtgtgattcctgaactcatgtggtttcagtaagccaccttgtagaaggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ggtggaatgtgtgattcctgaactcatgtggtttcagtaagccaccttgtagagggaagg 380
Query: 181 ggcagggaggctgagatgggaggagaggattcatagattcaatgagaacagagacaagtt 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcagggaggctgggatgggaggagaggattcatagattcaatgagaacagagacaagtt 440
Query: 241 aggacgttcatcatattaattaaaaactctccagggagtagggtgtttctccaaattcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggacgttcatcatattaattaaaaactctccagggagtagggtgtttctccaaattcac 500
Query: 301 cagatacagaattatcacataacccgtctgtactgcacctgggaatattccgcataccac 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggtacagaattatcacataacccgtctgtactgcacctgggaatattccgcataccac 560
Query: 361 aggggtacttacaccttcgtggtcactgaggccttagaccagccaagccaggaaccagtc 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggggtacttacaccttcatggtcactgaggccttagaccagccaagccaggaaccagtc 620
Query: 421 tagacacccacttaaaggcaaatggagaaagaaaatgaggggtgtgtacacagtggagtt 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagacactcacttaaaggcaaatggagaaagaaaatgaggggtgtgtacacagtggagtt 680
Query: 481 ttatttagccacaaagaatgaaattatgccatttgcaggaaaataagtagaactggagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatttagccacaaagaatgaaattatgccatttgcaggaaaataagtagaactggagaa 740
Query: 541 agaaccttgtgctaagtgaaataactgtgtacaagggcagatgctgcccgttgtctttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaccttgtgctaagtgaaataactgtgtacaagggcagatgctgcccgttgtctttac 800
Query: 601 ttga 604
||||
Sbjct: 801 ttga 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
