Query= MSMg01no197_d04.b1 MSMg01no197_d04.b1 CHROMAT_FILE:
MSMg01no197_d04.b1 PHD_FILE: MSMg01no197_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:00 2005
(649 letters)
>mm_chr16_43072913_43073961
Length = 1049
Score = 1197 bits (619), Expect = 0.0
Identities = 640/647 (98%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagcaaag-ttcggttgcacctgctcagttgttgcccacagctgtgtcatagga 62
|||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 ggaattcagcaaagctt-ggttgcacctgctcagttgttgctcacagctgtgtcatagga 262
Query: 63 ggggcagcacagttaagcttgttagcagtttgcctgtgctgtggcgtatctatgtttcat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggggcagcacagttaagcttgttagcagtttgcctgtgctgtggcgtatctatgtttcat 322
Query: 123 gtactcttgagttggaaagataggaggtgtcaactttgggctattaaactgggccattat 182
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 gtactcttgagttagaaagataggaggtgtcgactttgggctattaaactgggccattat 382
Query: 183 aacactcactggttatagtttcaaatacttttacttaattcttttgtgtctcaaatgctc 242
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 383 aacactcactggttatagtttcaaatacttttacttaattcttttctgtctcaaatgctc 442
Query: 243 aaatatttttactatatctcaactgccttagataatgtatatctcatatagtgtatctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaatatttttactatatctcaactgccttagataatgtatatctcatatagtgtatctct 502
Query: 303 ggagaaaaccgtgttgataatttttcgtcctaagagagacattttgtgtttggcttgatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggagaaaaccgtgttgataatttttcgtcctaagagagacattttgtgtttggcttgatt 562
Query: 363 tcaccatgttggcagccccactgtgtggggctggatgtagttattgatccatttagctga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcaccatgttggcagccccactgtgtggggctggatgtagttattgatccatttagctga 622
Query: 423 acagatttgaaagcatttggctatcagtggacacgtggggcccattcagaaagtgtaaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acagatttgaaagcatttggctatcagtggacacgtggggcccattcagaaagtgtaaga 682
Query: 483 gtatattgtgaggagatatgacttgtgcatgtgtctctcctgcagttggggttgaagaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtatattgtgaggagatatgacttgtgcatgtgtctctcctgcagttggggttgaagaaa 742
Query: 543 tgggaaaaaccatgaaattaaggtataaattctagatgagggactaacatacccatgaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgggaaaaaccatgaaattaaggtataaattctagatgagggactaacatacccatgaaa 802
Query: 603 tgttaaacctgctatattatcatttaatcaaatctacctccttggtg 649
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 803 tgttaaacctgctatattatcatttaatcaaatctaccttcttggtg 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_d04.g1 MSMg01no197_d04.g1 CHROMAT_FILE:
MSMg01no197_d04.g1 PHD_FILE: MSMg01no197_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:00 2005
(330 letters)
>mm_chr16_43201881_43202611
Length = 731
Score = 609 bits (315), Expect = e-179
Identities = 327/331 (98%), Gaps = 1/331 (0%)
Strand = Plus / Minus
Query: 1 atcctagatatgtaccacactctgcttaactggttttccacagatggacccttgggttgc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 608 atcctagatatgtaccacactctgcttaactgtttttccacagatggacccttgggttgc 549
Query: 61 tcctacctttggactatcaactatattaaccaaacttaaggcatagtttaggaaggcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcctacctttggactatcaactatattaaccaaacttaaggcatagtttaggaaggcttt 489
Query: 121 tcatttacaatagcttaagagaacgacttcttatgtttggtcaatcacattttagatcta 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcatttacaatagcttaagagagcgacttcttatgtttggtcaatcacattttagatcta 429
Query: 181 attgcttcagtaatagtaacttttatgtttattacatgttctagttagttattagctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 attgcttcagtaatagtaacttttatgtttattacatgttctagttagttattagctaaa 369
Query: 241 tgt-ttggtgtgcatatcacataaatatatatgtaaggatacacagaaatgtactgttta 299
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 368 tgtgttggtgtgcatatcacataaatatatatgtaaggatacatagaaatgtactgttta 309
Query: 300 cagtgaaaataaaacatactagtctctgtgg 330
|||||||||||||||||||||||||||||||
Sbjct: 308 cagtgaaaataaaacatactagtctctgtgg 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 731
Length adjustment: 9
Effective length of query: 321
Effective length of database: 722
Effective search space: 231762
Effective search space used: 231762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
