CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAAAAGATTACAAAGAAATAGAAATATCCAAGAAGTGCTTAAAG
AAATATTCCTTGTAGGGAATACAGATCAAAACTATTTACATTGCTTCTTA
TGTTTGAGTATATCACATCCAGAGATCCTCCAATTTGTGCCTCAGAAAAT
CCAAAAGCCATCATTGAAAGATCCACCTTTTTTATTGACAAAGAAAAGGT
CTGAGAGAAACAAATGGTTTTATTTACCCATGAACAAATTATATATGCAT
TGGACTTTTATATAACATTTTATGATAAGAGATATGAGATAGGAGAACAG
ATACCCACTGCAAAGAACTGATATAAGAGAATAGCTGTCTACAGAAAAAA
AAAAACTTACCTCATTCACAAGTAAGTTCTAATGTTCACTAAAAGGAAAC
TGGTGGTTAAAGATGAATAACATGCTTTGAAACAAGTATCATGAAAAAAA
GTTTAACAGACACTGAGGATCTATGGGGAGAGAGGGTGGATGGGAGGAAA
GANNNTCNNTGNTGTGTNTTNNTTCCTTTTTGAATCTTNNTTTCNGTNTT
GTTTTTTTTGTTTTTTTGCTCTCCTTTTTGCCCTCTGTTTCGCCGCTTAT
TGCTTGTTTTTTCCTCATCCTTGGTTTTTCTCCCTCCCTTATATCTTAAT
GGGTTACGCTCACCTGCCCGGTGCCTN

ATTATAATATTTTAATATAATTTTTTGATCTTTCTTCCTTCTTTTACAAT
GCTATGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGTGAAG
CTCCTGTAAAAAATTGCTTCCCCATTTTCTTAATCATCCAGGGTAAATGC
TAAATCATAAACAATCCTTGAATATTTCATCCTCAACATCTAATTCAAAA
ATGGTTTTTATTTAATCTTATATTTTTTTTTTTTGTGGACATTTAAATAA
TGCCTTGGTTTTTTTGCCTATATTTTTAATAAAAAAAAAAAAAACCCCTC
CCCCCTTTTGTGATTTGAGTAATTCTTAAAAAGGCTTTTCCCTTTTTTAC
CCCCCCCCATGTGCGCGATGGATGTTTACTTAACTTCTTTTCGGTCATCT
TTATTATATCTGTATTCTATTATATTTTTCCCATTCCACATATTAATTAT
AATAATTCTCTCACCTTTTTTTCTTTAAATTTTACTTAGTTTTTATACTT
TATTTAAGGAAATTTAATATTGATTTTTTCTTTATTTTTTTTTTATTATT
TTACCTTTAATTTTCCTATTTNTTTCTTCTTATCTCTTCTTATATTACTC
TTTATTCTTCTTCTATTATATTCTTTTATTTATATATTATTATATACTCA
TATAATTGCACCTAATCACTACAATTAGTTTAGTATTTTTATATTAATAT
TTAATGTGTCTTTATACCTTTGTTTTATGTATCATCCCGTCCCTTTCTTT
TTTAATTTCTTTTTTCTTTCTCCTTTTTCTTTCTTACTCTTGCTCTCACT
TCTTTATTACTTTTTTCTCCTTTATTTTCTCCCTCTTACACCATGATATA
ATCATCTTCAG

Query= MSMg01no197_j08.b1 MSMg01no197_j08.b1 CHROMAT_FILE:
MSMg01no197_j08.b1 PHD_FILE: MSMg01no197_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:31 2005
         (509 letters)



>mm_chr16_52271025_52271933
          Length = 909

 Score =  770 bits (398), Expect = 0.0
 Identities = 490/548 (89%), Gaps = 47/548 (8%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaaaagattacaaagaaatagaaatatccaagaagtgcttaaagaaatattcc 64
           ||||||||||||||||||||||||||||||||| |  || || |||||||||||||||||
Sbjct: 658 gaattctcaaaagattacaaagaaatagaaatagctgagcagcgcttaaagaaatattcc 599

                                                                       
Query: 65  ttgtagggaatacagatcaaaactatttacattgcttcttatgtttgagtatatcacatc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttgtagggaatacagatcaaaactatttacattgcttcttatgtttgagtatatcacatc 539

                                                                       
Query: 125 cagagatcctccaatttgtgcctcagaaaatccaaaagccatcattgaaagatccacctt 184
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 538 cagagatcctccaatttgtgcctcagaaaatctaaaagccatcattgaaagatccacctt 479

                                                                       
Query: 185 ttttattgacaaagaaaaggtctgagagaaacaaatggttttatttacccatgaacaaat 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttttattgacaaagaaaaagtctgagagaaacaaatggttttatttacccatgaacaaat 419

                                                                       
Query: 245 tatatatgcattggacttttatataacattttatgataagagatatgagataggagaaca 304
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 418 tatatatgcattggacttttatataacattttatgatgagagatatgagataggagaaca 359

                                                                       
Query: 305 gatacccactgcaaagaactgatataagagaatagctgtctacag-aaaaaaa----aaa 359
           |||||||||||||||||| |||||||||||||||||||||||||| |||||||    |||
Sbjct: 358 gatacccactgcaaagaattgatataagagaatagctgtctacagcaaaaaaacaaaaaa 299

                                                                       
Query: 360 ac--------------------------------------ttacctcattcacaagtaag 381
           ||                                      ||||||||||||||| ||||
Sbjct: 298 acaaaacaaacaaacaaacaaacaaaaaccaaaaaaccacttacctcattcacaaataag 239

                                                                       
Query: 382 ttctaatgttcactaaaaggaaactggtggttaaagatgaataacatgctttgaaacaag 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttctaatgttcactaaaaggaaactggtggttaaagatgaataacatgctttgaaacaag 179

                                                                       
Query: 442 tatcatgaaaaaaagtttaacagacactgaggatctatggggagagagggtg--gatggg 499
           ||||||||||||||||||||||||||||||| |||||||||||||| ||| |  ||||||
Sbjct: 178 tatcatgaaaaaaagtttaacagacactgagtatctatggggagag-ggg-gcagatggg 121

                   
Query: 500 aggaaaga 507
           ||||||||
Sbjct: 120 aggaaaga 113


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)