Query= MSMg01no198_b20.b1 MSMg01no198_b20.b1 CHROMAT_FILE:
MSMg01no198_b20.b1 PHD_FILE: MSMg01no198_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:14 2005
(323 letters)
>mm_chr16_8337313_8338036
Length = 724
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcataatctctttggcatacataaactaaagccaggatgttgcaaaggtgatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattctcataatctctttggcatacataaactaaagccaggatgttgcaaaggtgatt 460
Query: 64 accacagctctggggaaggaggactcatgctgtgtgctcagtgaataattgctataggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 accacagctctggggaaggaggactcatgctgtgtgctcagtgaataattgctataggaa 400
Query: 124 tgagaaacctatgccctttgtgcctcagctggccatgct-ggcccacagcagacatcacc 182
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 399 tgagaaacccatgccctttgtgcctcagctggccatgctctgcccacagcagacatcacc 340
Query: 183 agctgatggcttatattcagatcttgtctctgcctagagctccaacagacaagctcaact 242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agttgatggcttatattcagatcttgtctctgcctagagctccaacagacaagctcaact 280
Query: 243 gctttgagttcatttgcgacttgagaactatttgctatgcccaaatctttaattggtgct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gctttgagttcatttgcgacttgagaactatttgctatgcccaaatctttaattggtgct 220
Query: 303 gcccaagtctcttttt 318
||||||||||||||||
Sbjct: 219 gcccaagtctcttttt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_b20.g1 MSMg01no198_b20.g1 CHROMAT_FILE:
MSMg01no198_b20.g1 PHD_FILE: MSMg01no198_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:14 2005
(289 letters)
>mm_chr16_8172693_8173381
Length = 689
Score = 482 bits (249), Expect = e-140
Identities = 274/287 (95%), Gaps = 8/287 (2%)
Strand = Plus / Plus
Query: 1 aattcaattgaatggttctgggagctgcttgggtgacagggggaaggggatagctgcata 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 aattcaattgaatggctctgggagctgcttgggtgacagggggaaggggatagcggcata 260
Query: 61 gaattcatggtgaagatgttgataaatgggaggtttcacaactctggctcctgctcttcc 120
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtttatggtgaagatgttgataaatgggaggtttcacaactctggctcctgctcttcc 320
Query: 121 tcagaccctcctgttttctttgtttctgggacctaatcctctttgtagtccagtgttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagaccctcctgttttctttgtttctgggacctaatcctctttgtagtccagtgttgta 380
Query: 181 ggtatcagcccacaggtgggaagaagggaagaagggtccaggaagatgctctgcctgtgc 240
|||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 381 ggtatcagcccacaggtgggaagaaggg--------tgcaggaagatgctctgcctgtgc 432
Query: 241 aacaaggaccatgaagaaggagccttttgctataagcccagcaaaga 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aacaaggaccatgaagaaggagccttttgctataagcccagcaaaga 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
