Query= MSMg01no202_b08.b1 MSMg01no202_b08.b1 CHROMAT_FILE:
MSMg01no202_b08.b1 PHD_FILE: MSMg01no202_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:46 2005
(679 letters)
>mm_chr16_62017240_62018317
Length = 1078
Score = 1236 bits (639), Expect = 0.0
Identities = 666/675 (98%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcttcacttttaatgcatcattccaccgttttggattgtttataatacaccc 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 878 gaattctttcttcacttttaatgcatcattccaccattttggattgtttataatacaccc 819
Query: 65 caggcatattcaggaaaaaaaatgaaaaattgatccagtaagtacgaagtgaagctcacc 124
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 caggcatattgagg-aaaaaaatgaaaaattgatccagtaagtacgaagtgaagctcacc 760
Query: 125 agtgggcatttcaatgaaatcaaagaataatttcccatttgaaattctgaagaagtccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agtgggcatttcaatgaaatcaaagaataatttcccatttgaaattctgaagaagtccca 700
Query: 185 tcctggcagaaaccttgaataccacctaatgagcagccctaaagcagacacccatttgaa 244
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 699 tcctggcagaaaccttgaataccacataatgagcagccctaaagcagacatccatttgaa 640
Query: 245 attgtattcagatttatgactcacaaggaacatgtaataaagagaaattttaggaaaagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 attgtattcagatttatgactcacaaggaacatgtaataaagagaaattttaggaaaagt 580
Query: 305 taacataaagtaatgaataataacataaaaaggttcattgagttttatctcctgtgacaa 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 579 taacataaagtaatgaataataatataaaaaggttcattgagttttatctcctgtgacaa 520
Query: 365 aatgttttaaaatgccttttattttatgtatgtacaaatatgtgtacaaataaaaagtta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatgttttaaaatgccttttattttatgtatgtacaaatatgtgtacaaataaaaagtta 460
Query: 425 tctaaacttcattttacatttagccttgtctttcattttttctataaagtctttgattga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tctaaacttcattttacatttagccttgtctttcattttttctataaagtctttgattga 400
Query: 485 tattttaatacatgcatcaaaagttgtaatcctcaacacatctaacttttccagtagaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tattttaatacatgcatcaaaagttgtaatcctcaacacatctaacttttccagtagaaa 340
Query: 545 gaactgtaactatgtgcagacgtaccatacagttcagttcagagtatttcccattaagac 604
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 339 gaactgtaactatgcacagacgtaccatacagttcagttcagagcatttcccattaagac 280
Query: 605 aatgattcactagacacagcttgtgtagtcatattatgaaaaatgttttctatttacctt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aatgattcactagacacagcttgtgtagtcatattatgaaaaatgttttctatttacctt 220
Query: 665 ggtttgacacacaag 679
|||||||||||||||
Sbjct: 219 ggtttgacacacaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1078
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1068
Effective search space: 714492
Effective search space used: 714492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_b08.g1 MSMg01no202_b08.g1 CHROMAT_FILE:
MSMg01no202_b08.g1 PHD_FILE: MSMg01no202_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:46 2005
(603 letters)
>mm_chr16_61876230_61877232
Length = 1003
Score = 1147 bits (593), Expect = 0.0
Identities = 602/605 (99%), Gaps = 2/605 (0%)
Strand = Plus / Plus
Query: 1 acccctcagaatctcactaactgagaaaagtcattcatcctcaattatgagaggg-aaaa 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 200 acccctcagaatctcactaactgagaaaagtcattcatcctcaattatgagaggggaaaa 259
Query: 60 aggatgtgaagttcaagattagcctcagctacaatgtaatattcaatccagcctgagcta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggatgtgaagttcaagattagcctcagctacaatgtaatattcaatccagcctgagcta 319
Query: 120 catctgatactgactcaaaaaatatgaaggaaacaaaaacaaaaatagtaaatataacta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catctgatactgactcaaaaaatatgaaggaaacaaaaacaaaaatagtaaatataacta 379
Query: 180 ttatatacaacagagtttatttcaatttaagagcaaagaataaaagtagcttaaaagtag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttatatacaacagagtttatttcaatttaagagcaaagaataaaagtagcttaaaagtag 439
Query: 240 atttttaaaacttcttttgggtgtttttatcaaggaattaatttatataaaattttcctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atttttaaaacttcttttgggtgtttttatcaaggaattaatttatataaaattttcctg 499
Query: 300 aggaatatgactggtttgctgggttttaactagtatcataaaaagtcaagactgcagtaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggaatatgactggtttgctgggttttaactagtatcataaaaagtcaagactgcagtaa 559
Query: 360 tgaagacattaacacaaagcaaaactgtatttgcaacac-taatgggacccatattgctc 418
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 tgaagacattaacacaaagcaaaactgtatttgcaacacctaatgggacccatattgctc 619
Query: 419 atttcattactggggcgggtagtttggaaaactgcttttctataaaatcttattcaattt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atttcattactggggcgggtagtttggaaaactgcttttctataaaatcttattcaattt 679
Query: 479 gtcaaaaaatcacagagagtctctgtgacagtttccatctgctgcattaagagacttctc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcaaaaaatcacagagagtctctgtgacagtttccatctgctgcattaagagacttctc 739
Query: 539 tgaagtgctgtgagtgtgaaatgtatctgtgagtgtagggatatgtattagaattcagtt 598
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 740 tgaagtgctgtgagtgtgaaatgtatctgtgagtgtaggaatatgtattagaattcagtt 799
Query: 599 agaaa 603
|||||
Sbjct: 800 agaaa 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
