CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTATGTACATAAACCTGGCCCTCACAGAGATCTTTCTTCCTCTG
CTTCCTAATTGCTGGTACTACATGACTGCAGCACCATGCCCTTCAACTAA
TCTCTGGGTGAAATAGTAACACATTTGTTTTAAAACAAAGCTACTATTCA
GTATAGTTTCTTTATACTTATTGTCAAACATTACAGCAATTAGAATAAGT
ATTTTTATTCATTTATGAAGTTCTATATCTAACAAAAATACATGGCATAT
CAATAATCACAGTTATGATTTTCCAAAAGAAAACTAAAACTATTTAAATA
GCTATAGTTATAGAGATGATGACAATGATAATTACATGGTGACACATTCA
TGAAAAATTATTATGCCTGATCAGCTTAAAATAATCTGTCAACTACTGTT
TAGTTAAATTCAGGTTCTTTTTTTAATTATTTATTTATTGATTGATTGAT
TGATTTCAAACTCCAGATTTTCTTACCCTCCCGGTCTACCCTCCAACTGT
TCTACATCCCATACTTCCTCCCTGCCACCCTGTCCCCATGAGGATGGCCC
CACCACCCACCCCAACCCCACCAGACCTCTAAACTTGCTGGGGCCTCCAG
TCTCATGAGGGTTAGGTACATCATCTCTGATGGATACCGATCTGGAAGTC
CTCTACTATATAACTATC

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGATAGCGAAGCAGGAGTGGGT
GGGTTGGTAAGCAGGATGAGCAGGNATGGGATGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCNNTTNNNTCNNTTTNCCNTTNTCTNTT
TTTTNTCCTCTCCCCTCTCTTTTTCCTCTCCCTTTCTTCCCCCTTCCTTC
TTCCCCCCCCTCTCCCCCTCTTTTTCTTCTTTCCCCTCCCCCCCTCCTCT
CCCCCTCCTTCCTCCTTCTTTTTTTTCCTTCCCCCCCTTCCCCACCCCCC
CCCCCCCCTTGGAGTGAGTTCCAAGGACAAGGCCCCCCATGGGTGTGATG
GGGGAGCTGGTCGTTTTTTCCCCCCCCCAAAAAAACAAACCTCCCGCGCC
GGGGGCCGCTTTTTCCCCCTTCCTTCTCTTTCCTCCCTCTTCCCCTTCCC
TCTTTTTCTCCCCCTCCCCCCTCTCTTGCTTCCCCCTCCTCCCCTCCCTT
TTCCTTTTCCCCCCCTTTCTCTCCCTTCTCCCCCCTCCCCCCTCCATTTC
CCCCCTTCTCCCCCCCTTCCTCTCCCCCCTCCTTCTTTCTCCCCCCTTCC
TGCTCTCCCCTCCTCCTTTTTTTTTTGCTTCTTTCTTCTTGTTTTCTCTT
CCCCCCCCCCTTTGTCTCTCCTCCTCCTTCTTTCCCCCCCGCCTTCTCTT
TCCTCCCTCCTCCCCCTCTCTCTCCCTTCCCTCCTCCCCTTTT

Query= MSMg01no202_n08.b1 MSMg01no202_n08.b1 CHROMAT_FILE:
MSMg01no202_n08.b1 PHD_FILE: MSMg01no202_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:47 2005
         (603 letters)



>mm_chr16_71639378_71640380
          Length = 1003

 Score =  984 bits (509), Expect = 0.0
 Identities = 573/601 (95%), Gaps = 11/601 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   cggaattctttatgtacataaacctggccctcacagagatctttcttcctctgcttccta 62
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cggaattctttatgtaaataaacctggccctcacagagatctttcttcctctgcttccta 673

                                                                       
Query: 63  attgctggtactacatgactgcagcaccatgcccttcaactaatctctgggtgaaatagt 122
           |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 attgctgggactaaatgactgcagcaccatgcccttcaactaatctctgggtgaaatagt 613

                                                                       
Query: 123 aacacatttgttttaaaacaaagctactattcagtatagtttctttatacttattgtcaa 182
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 612 aacacatttgttttaaaacaaaactactattcagtatagtttctttatacttattgtcaa 553

                                                                       
Query: 183 acattacagcaattagaataagtatttttattcatttatgaagttctatatctaacaaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 552 acattacagcaattagaataagtatttttattcatttatgaagttctgtatctaacaaaa 493

                                                                       
Query: 243 atacatggcatatcaataatcacagttatgattttccaaaagaaaactaaaactatttaa 302
           ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 492 atacatgccatatcaataatcacagttatgattttccaacagaaaactaaaactatgtaa 433

                                                                       
Query: 303 atagctatagttatagagatgatgacaatgataattacatggtgacacattcatgaaaaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atagctatagttatagagatgatgacaatgataattacatggtgacacattcatgaaaaa 373

                                                                       
Query: 363 ttattatgcctgatcagcttaaaataatctgtcaactactgtttagttaaattcaggttc 422
           | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgattatgtttgatcagcttaaaataatctgtcaactactgtttagttaaattcaggttc 313

                                                                       
Query: 423 tttttttaattatttatttattgattgattgattgatttcaaactccagattttcttacc 482
           |||||||  ||||||||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 312 ttttttttcttatttatttatttactgattgattgattttaaactccagattttcttacc 253

                                                                       
Query: 483 ctcccggtctaccctccaactgttctacatcccatacttcctccctgccaccctgtcccc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 252 ctcccggtctaccctccaactgttctacatcccatacttcctccctgccaccctgtctcc 193

                                                                       
Query: 543 atgaggatggccccaccacccaccccaaccccaccagacctctaaacttgctggggcctc 602
           ||||||||||||||||||||||||           |||||||||||||||||||||||||
Sbjct: 192 atgaggatggccccaccacccacc-----------agacctctaaacttgctggggcctc 144

            
Query: 603 c 603
           |
Sbjct: 143 c 143


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)