Query= MSMg01no204_n17.b1 MSMg01no204_n17.b1 CHROMAT_FILE:
MSMg01no204_n17.b1 PHD_FILE: MSMg01no204_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:33 2005
(318 letters)
>mm_chr16_53540136_53540853
Length = 718
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcacacctcttgtagggtactcatgaaaattattacttataattatacactattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacacctcttgtagggtactcatgaaaattattacttataattatacactattta 264
Query: 65 ggaaaatgttcagtctaacctcagtattatcgctttttgtatacttttaaaaataacatt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaaatgttcagtttaacctcagtattatcgctttttgtatacttttaaaaataacatt 324
Query: 125 accttttcagtgttatgcttaaaataataacataattatttcaaatatatgaatattgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accttttcagtgttatgcttaaaataataacataattatttcaaatatatgaatattgag 384
Query: 185 gttaaaagatgtgatctacaataatcagattaagtcaagaccctgagtgattatttaacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttaaaagatgtgatctacaataatcagattaagtcaagaccctgagtgattatttaacc 444
Query: 245 aggtgttggtatatactgctaaccctgaaaacctgagtttaattttatttttttgtccca 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 aggtgttggtatatactgctaaccctgaaaacctgagtttaattttttttttttgtccca 504
Query: 305 cgccatatagagaa 318
|| |||||||||||
Sbjct: 505 cgtcatatagagaa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_n17.g1 MSMg01no204_n17.g1 CHROMAT_FILE:
MSMg01no204_n17.g1 PHD_FILE: MSMg01no204_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:33 2005
(290 letters)
>mm_chr16_53617302_53617991
Length = 690
Score = 495 bits (256), Expect = e-144
Identities = 280/290 (96%), Gaps = 5/290 (1%)
Strand = Plus / Minus
Query: 1 aaagaaaccgtagttccttgtcaaaagcttgtttatgatcaaatctgtcagcattctaga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 aaagaaaccgtagttccttgtcaaaagcttgtttatgatcaaatcagtcagcattctaga 326
Query: 61 atgggttggaagcagtttgtgagcacacacaactttctgtgaatctaccttcatggaaga 120
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 325 atggggtggaagcagtttgtgagcacacacaactttatgtgaatctaccttcatggaaca 266
Query: 121 gtatgccctcttctggcccccacagtgcctgctctcacacagccatactacttcctctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtatgccctcttctggcccccacagtgcctgctctcacacagccatactacttcctctat 206
Query: 181 acaaacaaagagacacatatttaaaaataaaataaaaatattttttaaataatcaattga 240
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 ----acaaagagacatatatttaaaaataaaataaaaata-tttttaaataatcaattga 151
Query: 241 atgataattaatttcagttggccagaagaagaaatttataatttcaaatt 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgataattaatttcagttggccagaagaagaaatttataatttcaaatt 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
