Query= MSMg01no205_a10.b1 MSMg01no205_a10.b1 CHROMAT_FILE:
MSMg01no205_a10.b1 PHD_FILE: MSMg01no205_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:47 2005
(309 letters)
>mm_chr16_36830756_36831464
Length = 709
Score = 559 bits (289), Expect = e-164
Identities = 301/305 (98%)
Strand = Plus / Minus
Query: 5 gaattctggtattcgctttgtctgattttcaatacataatagatacctgaggcattttac 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaattctggtattttctttgtctgattttcaatacataatagatacctgaggcattttac 450
Query: 65 caagatgtttacttagctcacagttctggaagttcaagggccttatgtcagggcactggc 124
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caagaggtttatttagctcacagttctggaagttcaagggccttatgtcagggcactggc 390
Query: 125 ttctggtgaaaattgtcttggctttcccatattacagatggtatgatagcatgaatagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttctggtgaaaattgtcttggctttcccatattacagatggtatgatagcatgaatagaa 330
Query: 185 gatatatagcacaaaagacttgagagagactaaggaggggggcaggcctttttattaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatatatagcacaaaagacttgagagagactaaggaggggggcaggcctttttattaaca 270
Query: 245 gtcttctcttaaggactatctaaactcttacaaaaactttatcaattcttttgagggtgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtcttctcttaaggactatctaaactcttacaaaaactttatcaattcttttgagggtgg 210
Query: 305 tgagc 309
|||||
Sbjct: 209 tgagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no205_a10.g1 MSMg01no205_a10.g1 CHROMAT_FILE:
MSMg01no205_a10.g1 PHD_FILE: MSMg01no205_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:47 2005
(334 letters)
>mm_chr16_36685283_36686016
Length = 734
Score = 615 bits (318), Expect = e-180
Identities = 331/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 1 tgggatgaaaagtgggattacattttaaacatagatggatcccactactatataattagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggatgaaaagtgggattacattttaaacatagatggatcccactactatataattagg 260
Query: 61 caaaagggacacacccaaaatgtgaactagattatttttatataaacattaaaaggactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaagggacacacccaaaatgtgaactagattatttttatataaacattaaaaggactc 320
Query: 121 aaagctaacctataatataagatgtgaagatggtacttaccttcagagtaggcgggagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 aaagctaacctataatataagatgtgaagatggtacttaccttcagagtaggcaggagga 380
Query: 181 actgattaagaaggcttatgtggaaaggatgcggaagtagctcagttggaag--tgtttg 238
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 381 actgattaagaaggcttatgtggaaaggatgcggaaatagctcagttggaagagtgtttg 440
Query: 239 cctagtatgtacaaagcctgagatttgattgacagcaccacataaaacaactatgatgga 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagcatgtacaaagcctgagatttgattgacagcaccacataaaacaactatgatgga 500
Query: 299 gaatgcctataatcccagtacttgggcagtaaagca 334
||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatgcctataatcccagtacttgggcagtaaagca 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
