Query= MSMg01no205_i10.b1 MSMg01no205_i10.b1 CHROMAT_FILE:
MSMg01no205_i10.b1 PHD_FILE: MSMg01no205_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:25 2005
(289 letters)
>mm_chr16_40878767_40879455
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 282/289 (97%), Gaps = 6/289 (2%)
Strand = Plus / Plus
Query: 1 gttggagtttagaaattacattatatatatatatatattagatcttataaagatataata 60
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 207 gttggagtttagaaattacatt-t-----tatatatattagatcttataaagatataata 260
Query: 61 caaatgaaataatgaagagaagttatgctcccaggagcgaagagcaaagcaacctcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatgaaataatgaagagaagttatgctcccaggagcgaagagcaaagcaacctcctta 320
Query: 121 ttgctgtatttgcatcctgtaccctttacaccatttcatacaggaacataattcatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgctgtatttgcatcctgtaccctttacaccatttcatacaggaacataattcatgcag 380
Query: 181 aacttgaatttaatgtccaatgaagcatctctaccactgactttaaagagatatatgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacttgaatttaatgtccaatgaagcatctctaccactgactttaaagagatatatgcac 440
Query: 241 tggaagtttagagttcttttggtgcagaattgagattctgttgattcag 289
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tggaagtttagagttcttttggtgcagaattcagattctgttgattcag 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no205_i10.g1 MSMg01no205_i10.g1 CHROMAT_FILE:
MSMg01no205_i10.g1 PHD_FILE: MSMg01no205_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:25 2005
(644 letters)
>mm_chr16_40993136_40994179
Length = 1044
Score = 870 bits (450), Expect = 0.0
Identities = 488/506 (96%), Gaps = 10/506 (1%)
Strand = Plus / Minus
Query: 144 gtatgtcagttctcagttactgctctatcattatgtcagtctgcttcctaccgcaacccc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 gtatgtcagttctcagttactgctctatcattatgtcagtctgcttcctaccgcaacccc 985
Query: 204 cgccatgatgatcatggactttaacctttgcagctgggagtctaaaattaaaagtcttct 263
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 984 cgccatgatgatcacagactttaacctttgcaactgggagtctaaaattaaaagtcttct 925
Query: 264 tttataagttaccttggccacattatttgtcatggcaatggaaaattaactaaggcaggt 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tttataagttaccttggccacattatttgtcatggcaatggaaaattaactaaggcaggt 865
Query: 324 gctaattttgtca-----ctcccccggagtctcggatcaactaaaatttgctttttttgg 378
||||||||||||| | ||||||||||||||||||| |||||||||||||||
Sbjct: 864 gctaattttgtcaatttgat-----ggagtctcggatcaactaagatttgctttttttgg 810
Query: 379 aatctgcaatggtgtcatgtatgaattaacaagagctagtagactatcatccagaatgga 438
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 809 aatctgcaatggtgttatgtatgaattaacaagagctagtagaccatcatccagaatgga 750
Query: 439 cactatgcagctcagatataaagggggccctgataagcagctattgccttattctgactt 498
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 749 cactatgcagctcagatataaagggggccctgataagcagctattgccttatcctgactt 690
Query: 499 tcttagtgccttgtaaacgaatgcttttagcctgttgctgttttttagttgctaccctcc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tcttagtgccttgtaaacgaatgcttttagcctgttgctgttttttagttgctaccctcc 630
Query: 559 attgacatccaagcttaattccttctctattctaaagttgagtgaacattactgtttctt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 attgacatccaagcttaattccttctctattctaaagttgagtgaacattactgtttctt 570
Query: 619 tgagaaatctctagggaacaactcag 644
||||||||||||||||||||||||||
Sbjct: 569 tgagaaatctctagggaacaactcag 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
