Query= MSMg01no209_e10.b1 MSMg01no209_e10.b1 CHROMAT_FILE:
MSMg01no209_e10.b1 PHD_FILE: MSMg01no209_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:21 2005
(304 letters)
>mm_chr16_93487302_93488001
Length = 700
Score = 451 bits (233), Expect = e-131
Identities = 280/305 (91%), Gaps = 20/305 (6%)
Strand = Plus / Minus
Query: 9 gaattcttaacccttaggtcgtcttaaccctactgtgtcttagccaccctggaagccttt 68
||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 468 gaattcttaacccttaggtcggc---a-cctactgtgtcttagccaccctggaagccttt 413
Query: 69 tttgtcttttgtttttgtcagggtcagaattcgtcagagaagtaaagattacagtttttg 128
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttgttttttgtttttgtcagggtcagaattcgtcagagaagtaaagattacagtttttg 353
Query: 129 gacaccatgagagatgaggttctgagccaggctggaggtgggcggttcctgtcgaggcgg 188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 352 gacaccatgagagatgaggttctgagccaggctggaggtgggcggttcctgtcgaggcag 293
Query: 189 aggagcataggagagttattcccgttcttcagaaagcgtgagagaaatttggcagcacca 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 292 aggagcataggagagttattcccgttcttcagaaagcgtgagagaaatttggcagcacta 233
Query: 249 tgtggatttcatgggatttggggg---t-----ttttttttgttc-gagtcctgtgagct 299
||| |||||||||||||||||||| | | |||| ||||||||||||||
Sbjct: 232 tgtagatttcatgggatttgggggccgtgaacat-------gttctgagtcctgtgagct 180
Query: 300 cggta 304
|||||
Sbjct: 179 cggta 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 700
Length adjustment: 9
Effective length of query: 295
Effective length of database: 691
Effective search space: 203845
Effective search space used: 203845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_e10.g1 MSMg01no209_e10.g1 CHROMAT_FILE:
MSMg01no209_e10.g1 PHD_FILE: MSMg01no209_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:21 2005
(240 letters)
>mm_chr16_93379900_93380539
Length = 640
Score = 410 bits (212), Expect = e-119
Identities = 234/242 (96%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 1 ttagacaccgtgggtggcctggagaggctatttttatgataactaaattggttcacttaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagacacggtgggtggcctggagaggctatttttatgataactaaattggttcacttaa 260
Query: 61 cttttgtgccacccagcagttcagctaatgaacctcctctcgatttatttgagagattag 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 cttttgtgccacccagcagttcagctaatgagcctcctctcgatttatttgagagattag 320
Query: 121 acaatgttctattctctatcatgagagttgtgttg--tttttttcttttttttttttttt 178
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 321 acaatgttctattctctatcatgagagttgtgttggttttttttcttgttttttttttta 380
Query: 179 taattccaagtcactaatatgagtacgggaaatagacatgagattaaaatacaattcagt 238
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 -aattccaagtcactaatatgagtacgggaaatagacatgaaattaaaatacaattcagt 439
Query: 239 tt 240
||
Sbjct: 440 tt 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
