Query= MSMg01no211_n23.b1 MSMg01no211_n23.b1 CHROMAT_FILE:
MSMg01no211_n23.b1 PHD_FILE: MSMg01no211_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:23 2005
(247 letters)
>mm_chr16_69471275_69471921
Length = 647
Score = 319 bits (165), Expect = 9e-92
Identities = 209/239 (87%), Gaps = 26/239 (10%)
Strand = Plus / Plus
Query: 6 aattggattttaatgactaggcataaacctggcaatatccactaacaaaacaagcaatct 65
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattggattttaatgactaggcacaaacctggcaatatccactaacaaaacaagcaatct 265
Query: 66 ctctaccaggcacgaccaaattgttgttttgtataagagaattgtaagaaaaatgaaata 125
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctctaccaggcatgataaaattgttgttttgtataagagaattgtaagaaaaatgaaata 325
Query: 126 tattggaaaaaatagaaagaaggaaagaaagaaagaaggaaagaaagaaagaaagaaaga 185
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 326 tattggaaaaa-tagaaagaaggaaagaaagaaagaa----agaaagaaagaaagaaaga 380
Query: 186 aagaaagaaagaaagaaagaaagaaagaaagaagggagggagggagggagggagggagg 244
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 aagaaagaaaga---------------------gggagggagggagggagggagggagg 418
Score = 120 bits (62), Expect = 8e-32
Identities = 71/74 (95%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 139 agaaa-gaaggaaagaaagaaagaaggaaagaaagaaagaaagaaagaaagaaagaaaga 197
||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 460 agaaaggaa-gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga 518
Query: 198 aagaaagaaagaaa 211
||||||||||||||
Sbjct: 519 aagaaagaaagaaa 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 4
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no211_n23.g1 MSMg01no211_n23.g1 CHROMAT_FILE:
MSMg01no211_n23.g1 PHD_FILE: MSMg01no211_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:24 2005
(643 letters)
>mm_chr16_69509141_69510184
Length = 1044
Score = 1069 bits (553), Expect = 0.0
Identities = 598/615 (97%), Gaps = 5/615 (0%)
Strand = Plus / Minus
Query: 1 tttgctacatatgtatctctggcctttattccctcctggatatttcatacaaattctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttgctacatatgtatctctggcctttattccctcctggatatttcatacaaattctgtg 702
Query: 61 gtgtcttacagttagtattttaatatcaaacaagtatcttaatatttttaatagttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 --gtcttacagttagtattttaatatcaaacaagtatcttaatatttttaatagttatta 644
Query: 121 tgtagctccataaagtttttcagttaatagttttatttagtagaaaagtgaggtcatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 643 tgtagctccataaagtttttcagttaatagttttatttagtagaaaagtaaggtcatgat 584
Query: 181 gtgcttattacatataattaagatcagaacattctctagtgatttaagtactaaatatat 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 583 gtgcttattacatataattaagatcagaacattctctggtgatttaagtactaaatatat 524
Query: 241 aaaaatttaaacagagaagtgtaagaaacataaatgaaagaattactaaaattgaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaaaatttaaacagagaagtgtaagaaacataaatgaaagaattactaaaattgaggtta 464
Query: 301 agttttaaaaaattccaaatttggaagaaattattgttggaaaatattaaagtttagttc 360
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||
Sbjct: 463 agttttaaaaaattccaaatctggaagaaattgttgttggaaaatattaaagtttagctc 404
Query: 361 tgaaatatatgactaaagtgaagagtaatatatatttaaattacagagtaaaatgacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgaaatatatgactaaagtgaagagtaatatatatttaaattacagagtaaaatgacaat 344
Query: 421 gagagtgagtaatggggcatgtgaaaagtaaatta---agtattaaaaatattgagttga 477
||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||
Sbjct: 343 gagagagagtaatggcgcatgtgaaaagtaaattattaagaattaaaaatattgagttga 284
Query: 478 tacattttctgaataaacaccattacaaacaatatggatcttttaatatgttgatattgt 537
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 taaattttctgaataaacaccattacaaacaatatggatcttttaatatgttgatattgt 224
Query: 538 atgtagtaaacagaggtattgagcacatacaaccacacacccatacacacacacatacac 597
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 223 atgtagtaaacagaggtattgagcacatacagccacacacccatacacacacacatacac 164
Query: 598 acacacacacacaca 612
| ||||||| |||||
Sbjct: 163 aaacacacatacaca 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space: 654522
Effective search space used: 654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|