Query= MSMg01no216_p12.b1 MSMg01no216_p12.b1 CHROMAT_FILE:
MSMg01no216_p12.b1 PHD_FILE: MSMg01no216_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:12 2005
(314 letters)
>mm_chr16_24159762_24160475
Length = 714
Score = 559 bits (289), Expect = e-164
Identities = 304/309 (98%)
Strand = Plus / Minus
Query: 5 gaattcacttcggttacagatgtctttgcttctctgcagttcttcacagttactgtccat 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcactttggttacagatgtctttgcttctctgcagttcttcacagttactgtccat 454
Query: 65 tggtactcgacagccaggtgctagaaatgacatatgtcctttcgtcagaggggattattt 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tggtactcgacagtcaggtgctagaaatgacatatgtcctttcgtcagaggggattattt 394
Query: 125 ccccagggccattgtttcccaggtaggcataaagcagatctctcaactttcaggttggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ccccagggccattgtttcccaggtaggcataaagcagatctctcaactttcaggttggca 334
Query: 185 ggatctggaagactttctaatgctgtcttcaccactcccccttgtcttctttgttccaca 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggatctagaagactttctaatgctgtcttcaccactcccccttgtcttctttgttccaca 274
Query: 245 aaattgcaaaccatctgggcctactgtgtttattatctttacccttgcttctcttatgga 304
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 273 aaattgcaaaccatctgggcctactgtgtccattatctttacccttgcttctcttatgga 214
Query: 305 ccgctcttg 313
|||||||||
Sbjct: 213 ccgctcttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_p12.g1 MSMg01no216_p12.g1 CHROMAT_FILE:
MSMg01no216_p12.g1 PHD_FILE: MSMg01no216_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:12 2005
(326 letters)
>mm_chr16_24067221_24067944
Length = 724
Score = 536 bits (277), Expect = e-157
Identities = 314/327 (96%), Gaps = 4/327 (1%)
Strand = Plus / Plus
Query: 1 ttgggggacagtcaaggcccccatggtgtttagtgttgggtcctgaacatctaacggggc 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||
Sbjct: 201 ttgggggacagtcaaggcccccacggtgtttagtgttgggtcctgaacatctaatgaggc 260
Query: 61 tttttaaaaacacatggcaaagaaggaaaatgatccagttttagggatta-ctccggtga 119
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 261 -ttttaaaaacacatggcaaagaaggaaaatgatccagttttagggattaggt--ggtga 317
Query: 120 tgagacgtagtgggtaggaggggtgcttacggaaacgtctggtttacagaggtacatggc 179
||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 318 tgagacgaagggggtaggaggggtgcttacggaaacgtctggtttacagaggcacatggc 377
Query: 180 ctggtactcacaactcaagaagagtttgtgaacagtaggatgagtttaatttccacaagc 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctggtactcaaaactcaagaagagtttgtgaacagtaggatgagtttaatttccacaagc 437
Query: 240 taagggggtgtatcaggagcttagtggggttctgcatagctcacaaattctagacatggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taagggggtgtatcaggagcttagtggggttctgcatagctcacaaattctagacatggc 497
Query: 300 tgcagtcaccactgaccctgatggtga 326
|||||||||||||| ||||||||||||
Sbjct: 498 tgcagtcaccactggccctgatggtga 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 724
Length adjustment: 9
Effective length of query: 317
Effective length of database: 715
Effective search space: 226655
Effective search space used: 226655
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
