Query= MSMg01no217_e01.b1 MSMg01no217_e01.b1 CHROMAT_FILE:
MSMg01no217_e01.b1 PHD_FILE: MSMg01no217_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:40 2005
(421 letters)
>mm_chr16_33772425_33773244
Length = 820
Score = 694 bits (359), Expect = 0.0
Identities = 398/416 (95%), Gaps = 13/416 (3%)
Strand = Plus / Plus
Query: 15 ggaatt-accctgtagactaggct-gc----aactcaaagatctgcctcctccctctgcc 68
|||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 209 ggaattcaccctgtagactaggctggccttgaactcaaaaatctgcctcctccctctgcc 268
Query: 69 tcctgaatgctggaattaaaggcatgtaccaccattatccagcccttctcccccttttta 128
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcgtgaatgctgggattaaaggcatgtaccaccattatccagcccttctcccccttttta 328
Query: 129 atgctaatatccattatatacttctgtaccaatctgtttagccattggtcagtggacact 188
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 329 atgctaatatccattatatacttctgtaccaatttgtttagccattggtcagtggacact 388
Query: 189 taggttatttctacatcttggcttctgagactagatggaagccttttgcttcatcaggtg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taggttatttctacatcttggcttctgagactagatggaagccttttgcttcatcaggtg 448
Query: 249 gcctgaacattcaacccacttgggcctccaccctggctgagcctctgccccaggggtctg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 449 gcctgaacattcaacccacttgggcctccaccctggctgagcctctgccccaggg-tctg 507
Query: 309 gtttgctgggaaggaaagttcttcaagcatcctaagactcagcctgaagacttctgtact 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtttgctgggaaggaaagttcttcaagcatcctaagactcagcctgaagacttctgtact 567
Query: 369 t---gttttcactcattttccagtctcttggggagcaaaggncagatgggtagtgt 421
| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 568 tccagt---cactcattttccagtctcttggggagcaaaggccagatgggtagtgt 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_e01.g1 MSMg01no217_e01.g1 CHROMAT_FILE:
MSMg01no217_e01.g1 PHD_FILE: MSMg01no217_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:40 2005
(382 letters)
>mm_chr16_33929525_33930306
Length = 782
Score = 634 bits (328), Expect = 0.0
Identities = 364/376 (96%)
Strand = Plus / Minus
Query: 5 ctgggtacatactagagtaagaacatgcaagaggctcccagaattcagtgatcacttgag 64
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 512 ctggggacatactagagtaagaacatgcaagaggctcccagaattcagtgatcagttgag 453
Query: 65 caatctgattgttgaaggggtaccctagagagaacggggtgaggaactccccccctggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 452 caatctgattgttgaaggggtaccctagagagaacggggtgaggaactcccaccctggag 393
Query: 125 gctggctagagactgaaggtaggtcaagagtattgccaggacaatggtgaaggagatgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctggctagagactgaaggtaggtcaagagtattgccaggacaatggtgaaggagatgtg 333
Query: 185 ggttgaatctaaacgggactgagctcaggtctgatgggaagccggtgcctgcagacagct 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 332 ggttgaatctaaacgggactgagctcaggtctgatgggaagccagtgcctgcagacagct 273
Query: 245 gtcctgagagactcggctgtgaacagagaggggagatgggagcacacagctcggtgggag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gtcctgagagactcggctgtgaacagagaggggagatgggagcacacagctcggtgggag 213
Query: 305 cacgtttgttctctcttcctgaccttccttttctttctctcctcttctccttctttctct 364
|||||||||||| |||||||||||||||| | |||||||||| |||||| ||||||||
Sbjct: 212 cacgtttgttctttcttcctgaccttcctaccccttctctcctcctctcctactttctct 153
Query: 365 tcctcccttcaaactg 380
||||||||||| ||||
Sbjct: 152 tcctcccttcagactg 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
