Query= MSMg01no231_k13.b1 MSMg01no231_k13.b1 CHROMAT_FILE:
MSMg01no231_k13.b1 PHD_FILE: MSMg01no231_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:00 2005
(315 letters)
>mm_chr16_74496352_74497062
Length = 711
Score = 451 bits (233), Expect = e-131
Identities = 293/315 (93%), Gaps = 13/315 (4%)
Strand = Plus / Plus
Query: 5 gaattcacatcacaccttctttggctgggcactctctctacagtaacattctagaatttt 64
|||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||
Sbjct: 206 gaattcacatcacaccttctttggctgggcacactctctacactaatattctagaacttt 265
Query: 65 tgtcattaaaaattctgtatgaaaaaatacttaaatatt-aaaattaaattttatttaac 123
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 266 tgtcat-aaaaattctgtatgaaaaa-tacttaaatatttaaaattaaattttatttaac 323
Query: 124 tctattttcagaaattgtatataatttcaaggtagt-ttcaaggtagtagtggtatgata 182
||||||||||||||||||||| |||| || || |||||||||||||||||||||||
Sbjct: 324 tctattttcagaaattgtatacaatt---ag--aggcttcaaggtagtagtggtatgata 378
Query: 183 tacatgccaatcataaacagggggaatt-gaaacaatcacctttctttggaaatggttct 241
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct: 379 tacatgccaatcataaacaggggga-ttcgaaacaatcacctttctctggaaatggttct 437
Query: 242 cacatcctgagc-ggctatcatgtagactgatgccctgtcatttttctctgtctccataa 300
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 cacatcctga-caggctatcatgtagactgatgccctgtcatttttctctgtctccatga 496
Query: 301 gaaaatatgtactgt 315
|||| ||||||||||
Sbjct: 497 gaaattatgtactgt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 711
Length adjustment: 9
Effective length of query: 306
Effective length of database: 702
Effective search space: 214812
Effective search space used: 214812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_k13.g1 MSMg01no231_k13.g1 CHROMAT_FILE:
MSMg01no231_k13.g1 PHD_FILE: MSMg01no231_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:00 2005
(292 letters)
>mm_chr16_74650571_74651262
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 tcacaaaaaggttctatagaaggttgattatgacttgtcagaataaagcaatcagtgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcacaaaaaggttctatagaaggttgattatgacttgtcagaataaagcaatcagtgagc 433
Query: 61 ttcttttatccctcctatcccctggtttagaaaacacggagttcatatacccttaagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttcttttatccctcctatcccctggtttagaaaacacggagttcatatacccttaagtgt 373
Query: 121 attcatgcatatatgcatcagtgtacatatgtgtttataatgtgtgcatagttatcttca 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actcatgcatatatgcatcagtgtacatatgtgtttataatgtgtgcatagttatcttca 313
Query: 181 tgaatagagagaagggttccacataaatataataattatcattgctatttgctgattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgaatagagagaagggttccacataaatataataattatcattgctatttgctgattttc 253
Query: 241 ttacttactgattttcctttggaatatttggtatgtaaattgacttttattc 292
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 ttacttactgattttcctttggaatatttggtatgtaagttgacttttattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
