Query= MSMg01no232_o10.b1 MSMg01no232_o10.b1 CHROMAT_FILE:
MSMg01no232_o10.b1 PHD_FILE: MSMg01no232_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:30 2005
(450 letters)
>mm_chr16_48980382_48981232
Length = 851
Score = 795 bits (411), Expect = 0.0
Identities = 435/443 (98%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgtttacattgattatgtaacataaatattcctgtcctggctagggactact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaattcagtgtttacattgattatgtaacataaatattcctgtcctggctagggactact 383
Query: 65 tttgatattgctttcccaatttataaaatactgac-tttttttcaaaatgtatttattaa 123
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 382 tttgatattgttttcccaatttataaaatactgacttttttttcaaaatgtatttattaa 323
Query: 124 taaaattaatcccatacagaatatatagattggggcattttaaacatttcatcttttgac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taaaattaatcccatacagaatatatagattggggcattttaaacatttcatcttttgac 263
Query: 184 cacttttcacctgagaaaattttacatcatctccagatgcaaatcaaatagttaccaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cacttttcacctgagaaaattttacatcatctccagatgcaaatcaaatagttaccaata 203
Query: 244 aaacgtaaatttattcggtataaatgtaatttgacatttattaaacaacaataggtttgc 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 202 aaacgtaaatttattcggtataaatgtaatttgacatttattaaacaataataggtttgc 143
Query: 304 atactgataaggtagatgttcatttttatacaaagaattaaatcttgactgaatatttgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atactgataaggtagatgttcatttttatacaaagaattaaatcttgactgaatatttgc 83
Query: 364 tattaattgtacagtgtagcaaatttttccatagttaaaaacaatatacatattgttctt 423
| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tgttaattatacagtgtagctaatttttccatagttaaaaacaatatacatattgttctt 23
Query: 424 ttttggttgggggggggggtttg 446
|||||||| ||||||||| ||||
Sbjct: 22 ttttggtttggggggggg-tttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space: 370040
Effective search space used: 370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_o10.g1 MSMg01no232_o10.g1 CHROMAT_FILE:
MSMg01no232_o10.g1 PHD_FILE: MSMg01no232_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:30 2005
(647 letters)
>mm_chr16_48939972_48941018
Length = 1047
Score = 1230 bits (636), Expect = 0.0
Identities = 645/648 (99%), Gaps = 2/648 (0%)
Strand = Plus / Plus
Query: 1 cagagcttgaatggaagagccatatggatcctgtgcaggccattacagagagtgcaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagcttgaatggaagagccatatggatcctgtgcaggccattacagagagtgcaacct 260
Query: 61 ctgaggtttttctctatttccttctattctttctcaggctcctacactgaaatctcagaa 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ctgaggtttttctctatttccttctattctttctca-gctcctacactgaaatctcagaa 319
Query: 121 tcacataacctataaactaaatcctgcctttaacaactgaaaatatacctttataataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcacataacctataaactaaatcctgcctttaacaactgaaaatatacctttataataag 379
Query: 181 gaatatcacagaaaccatttttaatgttttgttaaaagaaatacacccaggtgtttaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaatatcacagaaaccatttttaatgttttgttaaaagaaatacacccaggtgtttaaaa 439
Query: 241 a-ttaaaaaaaattaatggtggaagatgacaaatatatcccatcaaagacagtgcttatt 299
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 atttaaaaaaaattaatggtggaagatgacaaatatattccatcaaagacagtgcttatt 499
Query: 300 agagagataaaatgtttaaactcctgcaacacaagtattattatgtcactatatattgta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagagataaaatgtttaaactcctgcaacacaagtattattatgtcactatatattgta 559
Query: 360 taaagtttgcctaaaataaaaaaattacattccatcaaaattaaaaacagttgtacttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taaagtttgcctaaaataaaaaaattacattccatcaaaattaaaaacagttgtacttta 619
Query: 420 aagacattaggcaaatggaaagacaacttaaagaacaggtaaaaatgcctacagatcaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagacattaggcaaatggaaagacaacttaaagaacaggtaaaaatgcctacagatcaaa 679
Query: 480 atgttccacagggctggtgatagcttattgcgagagcactttcatactactcatgaggta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgttccacagggctggtgatagcttattgcgagagcactttcatactactcatgaggta 739
Query: 540 caggaaaaatcctactcgtaataaacatacaaagaactcaaaggtctcaacagcaaaaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caggaaaaatcctactcgtaataaacatacaaagaactcaaaggtctcaacagcaaaaga 799
Query: 600 ttttcaatttttaaaataggtcaagaaattgaacaaatttactcaaga 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttttcaatttttaaaataggtcaagaaattgaacaaatttactcaaga 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
