TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGTTCTGAGCCCCATTTTTTTTTTCTGATCAAGGCTCAA
ATTTTATTGTTGCGACACTAGTTATGAAGGAAGGGGGAGGGGACCCGATT
CCCGCCGAATAATCTCTGGTCCAGTAGAAAGGTGCATGTGTGTGGCTCTG
CAGGTTCCAGCAGTGGCCATGGCAGAACGAATGAGCAGGAAGCTCCACCC
CTGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACATTTCCTCCCT
TTTATTAACAAAACTTAAAAAAAGAAAAAGCTGGCCTGAAGGGGGAAAAA
TTATCTATGCTCAATAGTTCTGCCTGGAATCTAGGGCTAAAGAAAAAACT
TGCTTTCTTGGGATTCCTTAACTTTTCTTATGGTAAACTGTATCTGGTTA
AGACTGTCCTTTCTTATCTTAGTAAACAACTAACTGAAAAGCCTGGAGCT
GTAGGCTCTGACTTTATAATGCTAATTAGTACTTGGTAGGTAACTTTCTA
GTTGAATTTTAAGTAGGGCATTGGAACTCTGGCTAAGTTTGACTGAACAA
ATGTGAAATACACTATAATAAGAATAACACTAAGTTGATATTCCTCCGCA
TTTGAGGAATATCAACTTAGTGCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTN

AACCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTAAAAAAAAAACTATCTTCA
TCATCAAAGCCATCTAGAACAACATTTTATTAGGTTTACAAATTTAAAAT
TGATTGTAGTGAGGTAACCAAAAAACTTTTTAAAAAAATTTCTAATAATC
TTTGTCTTGAAAAAAGCTAAGGGAGGGGTATAACTTCTTGTTAAATTAAT
TAATCTGTGTGGGGTATAAAAAAGATAATATTTATTGAAAAAGGCAAAAC
AAAACAGAATCTGTTATGTCAGGGTAGGGGCGTTGTTACATAATTTTTTT
TTTAAGAATGTATTTTGAGCCAGATTATCAGCAGCAGAGAAATTCTGTGT
TTTAGACTCATGATTCCTTATAATTCATACAATCCCTTAAATAACTATTC
TTTTAAATGCATGGCTGGCCCATAAGTGCCTCTCTGCTCTGATTTATAAA
GGTTCCGCGCTCATTCAGTGCAGGAGACTTCATTCAGAGACACCAAAGCA
GACAAGACAGCTCCCAGTGAATTAAATCTCAGATTAAGGTGCTGGTAGTG
CTGGTTGGGCTGCTTGTTGGTTTGTTTCATTTTGTGGTTTGGAGACAGCA
TCTGAGTGAGTCATCCAGATAAGTCACCAACTTCCCATCTAGAACCACAG
GTGTACGCTACCAC

Query= MSMg01no233_o04.g1 MSMg01no233_o04.g1 CHROMAT_FILE:
MSMg01no233_o04.g1 PHD_FILE: MSMg01no233_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:42 2005
         (636 letters)



>mm_chr16_70365416_70366453
          Length = 1038

 Score = 1174 bits (607), Expect = 0.0
 Identities = 628/635 (98%), Gaps = 2/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaaaaaaaaactatcttcatcatcaaagccatctagaacaacattttattaggtttacaa 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 aaaaaaaaaacgatcttcatcatcaaagccatctagaacaacattttattaggtttacaa 779

                                                                       
Query: 64  atttaaaattgattgtagtgaggtaaccaaaaaactttttaaaaaaatttctaataatct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atttaaaattgattgtagtgaggtaaccaaaaaactttttaaaaaaatttctaataatct 719

                                                                       
Query: 124 ttgtcttgaaaaaagctaa-gggaggggt-ataacttcttgttaaattaattaatctgtg 181
           |||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 718 ttgtattgaaaaaagctaagggggggggtaataacttcttgttaaattaattaatctgtg 659

                                                                       
Query: 182 tggggtataaaaaagataatatttattgaaaaaggcaaaacaaaacagaatctgttatgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tggggtataaaaaagataatatttattgaaaaaggcaaaacaaaacagaatctgttatgt 599

                                                                       
Query: 242 cagggtaggggcgttgttacataattttttttttaagaatgtattttgagccagattatc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cagggtaggggcgttgttacataattttttttttaagaatgtattttgagccagattatc 539

                                                                       
Query: 302 agcagcagagaaattctgtgttttagactcatgattccttataattcatacaatccctta 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agcagcagagaaattctgtgttttagactcatgattccttataattcatacaatccctta 479

                                                                       
Query: 362 aataactattcttttaaatgcatggctggcccataagtgcctctctgctctgatttataa 421
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aataactattcttttaaatgaatggctggcccataagtgcctctctgctctgatttataa 419

                                                                       
Query: 422 aggttccgcgctcattcagtgcaggagacttcattcagagacaccaaagcagacaagaca 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aggttccgcgctcattcagtgcaggagacttcattcagagacaccaaagcagacaagaca 359

                                                                       
Query: 482 gctcccagtgaattaaatctcagattaaggtgctggtagtgctggttgggctgcttgttg 541
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gctcccagtgaattatatctcagattaaggtgctggtagtgctggttgggctgcttgttg 299

                                                                       
Query: 542 gtttgtttcattttgtggtttggagacagcatctgagtgagtcatccagataagtcacca 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtttgtttcattttgtggtttggagacagcatctgagtgagtcatccagataagtcacca 239

                                              
Query: 602 acttcccatctagaaccacaggtgtacgctaccac 636
           |||||||||||||||||||||||||||||||||||
Sbjct: 238 acttcccatctagaaccacaggtgtacgctaccac 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1038
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1028
Effective search space:   643528
Effective search space used:   643528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)